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NECEvent2014_8_1_scaffold_243_13

Organism: NECEvent2014_8_1_Clostridium_paraputrificum_29_36

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 11489..12190

Top 3 Functional Annotations

Value Algorithm Source
PhoB family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0003170444 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 230.0
  • Bit_score: 378
  • Evalue 4.00e-102
  • rbh
Response regulator {ECO:0000313|EMBL:AIY81168.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 230.0
  • Bit_score: 382
  • Evalue 5.10e-103
regulatory protein VanR similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 230.0
  • Bit_score: 378
  • Evalue 1.50e-102

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGAAAGGGTATAATGTTTTAGTGGTTGATGATGATAAAGCAATAGTTGAAGCTATAGAAATCTATCTTAGAGGAGAAGGATATAATATTTTCAAAGCTTATGATGGTGCTGAAGCTTTAGAAGTAATAAAGGAAGAAGAGATACACCTTGTCATAATGGATATTATGATGCCAAAGATGGATGGAACAAGGGCTACTCTTAAAATAAGAGAAGAAAAAGAGATACCAATAATCATGCTTTCAGCAAAGTCAGAGGATACTGATAAAATATTAGGACTTAATATTGGAGCTGATGATTATGTAACAAAGCCTTTTAATCCCTTAGAATTAATTGCAAGGGTAAATTCTCAAATAAGAAGATATACAAGGTTTTCACCTTTAAAGGAAAACAATGATGTTATAAAAATTGGTGCTATAGAGCTTAATAAGAGGAGTAAGGTTGTTTTGAGAGATGGAGAGATAGCAAAGTTAACCCCATTAGAATTTAAAATTCTTTCATTGTTAATGGATAACCCAGGAAGAGTATTTTCTATTGAAGAAATTTATGAAAGGGTATGGAATGAAGTAGCCTTTAATGTAGACACAGTAACAGTGCATATTAGAAGAATAAGAGAAAAGATAGAAATTAATCCTAAAGAACCTAGATATTTAAAGGTGGTGTGGGGAATTGGATATAAATTTGAAAAAGATCACAGGGGATAA
PROTEIN sequence
Length: 234
MKGYNVLVVDDDKAIVEAIEIYLRGEGYNIFKAYDGAEALEVIKEEEIHLVIMDIMMPKMDGTRATLKIREEKEIPIIMLSAKSEDTDKILGLNIGADDYVTKPFNPLELIARVNSQIRRYTRFSPLKENNDVIKIGAIELNKRSKVVLRDGEIAKLTPLEFKILSLLMDNPGRVFSIEEIYERVWNEVAFNVDTVTVHIRRIREKIEINPKEPRYLKVVWGIGYKFEKDHRG*