ggKbase home page

NECEvent2014_8_1_scaffold_243

Alias: 178_001_scaffold_243

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_243_1
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..445)
DNA (444bp) protein (148aa)
Transcriptional regulator, AraC family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSQ8_CELLD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ82892.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilytic
NECEvent2014_8_1_scaffold_243_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

615..1568
DNA (954bp) protein (318aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAW7_9CLOT rbh
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25091.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
iron chelate uptake ABC transporter permease
NECEvent2014_8_1_scaffold_243_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1558..2511
DNA (954bp) protein (318aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBV3_9CLOT rbh
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25092.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
iron chelate uptake ABC transporter permease
NECEvent2014_8_1_scaffold_243_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2505..3260
DNA (756bp) protein (252aa)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAV0_9CLOT rbh
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY25093.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
iron ABC transporter ATP-binding protein
NECEvent2014_8_1_scaffold_243_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3280..4212
DNA (933bp) protein (311aa)
Periplasmic binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAU4_9CLOT rbh
Periplasmic binding protein {ECO:0000313|EMBL:EKY25094.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ferric siderophore ABC transporter,substrate-binding protein
NECEvent2014_8_1_scaffold_243_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4323..5504
DNA (1182bp) protein (394aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHH2_CLOPF rbh
sodium/hydrogen exchanger family protein
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:AIY84814.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium barat
NECEvent2014_8_1_scaffold_243_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5567..5995
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY29801.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_8_1_scaffold_243_8
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6081..7421)
DNA (1341bp) protein (447aa)
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W6G7_9FIRM rbh
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein {ECO:0000313|EMBL:EFF63434.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichale
transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein
NECEvent2014_8_1_scaffold_243_9
unknown

Not on your lists

comp(7627..8193)
DNA (567bp) protein (189aa)

This feature has no annotations

NECEvent2014_8_1_scaffold_243_trna_1
unknown

Not on your lists

8339..8410
DNA (72bp)
transferRNA
NECEvent2014_8_1_scaffold_243_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8809..10116
DNA (1308bp) protein (436aa)
CBS/transporter domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZQ2_CLOBO
CBS/transporter domain-containing protein
CBS/transporter domain protein {ECO:0000313|EMBL:EES47731.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str
NECEvent2014_8_1_scaffold_243_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10176..10769
DNA (594bp) protein (198aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MGM9_9CLOT
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGF55503.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sacc
NECEvent2014_8_1_scaffold_243_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10792..11316
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN73_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96026.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_1_scaffold_243_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11489..12190
DNA (702bp) protein (234aa)
PhoB family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0003170444 rbh
Response regulator {ECO:0000313|EMBL:AIY81168.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
regulatory protein VanR
NECEvent2014_8_1_scaffold_243_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12156..13175
DNA (1020bp) protein (340aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=M8J5M8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84716.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_1_scaffold_243_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13193..14038
DNA (846bp) protein (282aa)
Mrp protein n=4 Tax=Clostridium butyricum RepID=B1R1W3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92350.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
mrp; protein Mrp
NECEvent2014_8_1_scaffold_243_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14338..14526
DNA (189bp) protein (63aa)
Ferredoxin n=4 Tax=Clostridium butyricum RepID=B1R1W1_CLOBU
Ferredoxin {ECO:0000313|EMBL:KJZ84735.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ferredoxin
NECEvent2014_8_1_scaffold_243_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14590..14796)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1W0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29623.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 18 items

View Taxonomy