ggKbase home page

NECEvent2014_8_1_Clostridium_paraputrificum_29_36

NECEvent2014_8_1_Clostridium_paraputrificum_29_36 NECEvent2014_8_1_Clostridium_30_43
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

rpS3 100% to Clostridium paraputrificum

Search / Filter Contigs


Partial matches in Contig names

Min-Max Range: 23.02 - 36.22

Min-Max Range: 8.04 - 158.75

Upper-bound value
<
Reset filters
Displaying items 1-50 of 233 in total
Contig (seq size) Coding Density (%) Species Genus Order Class Phylum Domain
NECEvent2014_8_1_scaffold_2576
1829 bp | 15.99 x | 28.49%
1.00383
Clostridium sulfi...
50.00%
Clostridium
75.00%
Clostridiales
75.00%
Clostridia
75.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1505
3164 bp | 14.55 x | 25.95%
1.00221
Clostridium sp. BL8
66.67%
Clostridium
66.67%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_3664
1270 bp | 18.19 x | 25.98%
0.999213
Intestinibacter b...
100.00%
Intestinibacter
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_3394
1379 bp | 12.29 x | 24.87%
0.99855
Clostridium sp. 7...
100.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_2782
1698 bp | 158.75 x | 34.63%
0.998233
Clostridium baratii
100.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1283
3732 bp | 15.31 x | 26.21%
0.996785
Clostridium aceto...
75.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_2821
1673 bp | 11.75 x | 25.52%
0.991632
Clostridium sp. M...
50.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1580
3004 bp | 8.09 x | 29.06%
0.98968
Clostridium perfr...
50.00%
Clostridium
50.00%
Clostridiales
50.00%
Clostridia
50.00%
Firmicutes
50.00%
Bacteria
50.00%
NECEvent2014_8_1_scaffold_2631
1787 bp | 10.58 x | 25.29%
0.988808

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

NECEvent2014_8_1_scaffold_2635
1785 bp | 17.48 x | 26.27%
0.986555
Clostridium sp. D...
50.00%
Clostridium
50.00%
Clostridiales
50.00%
Clostridia
50.00%
Firmicutes
50.00%
Bacteria
50.00%
NECEvent2014_8_1_scaffold_1976
2413 bp | 12.68 x | 25.32%
0.984666
uncultured archaeon
50.00%
Vibrio
50.00%
Vibrionales
50.00%
Gammaproteobacteria
50.00%
Proteobacteria
50.00%
Bacteria
50.00%
NECEvent2014_8_1_scaffold_2258
2090 bp | 28.42 x | 29.43%
0.977512
Clostridium baratii
50.00%
Clostridium
50.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_4149
1118 bp | 8.59 x | 23.79%
0.971377
Clostridium sp. C...
50.00%
Clostridium
50.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_2179
2182 bp | 19.87 x | 27.82%
0.970669
Clostridium sp. 7...
66.67%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1035
4517 bp | 19.53 x | 26.12%
0.967678
Clostridium sp. 7...
25.00%
Clostridium
50.00%
Clostridiales
50.00%
Clostridia
50.00%
Firmicutes
50.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_2742
1719 bp | 12.74 x | 26.18%
0.966841
Clostridium botul...
66.67%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1560
3050 bp | 15.98 x | 26.66%
0.965902
Clostridium botul...
100.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_4383
1057 bp | 10.22 x | 23.65%
0.962157
Clostridium baratii
50.00%
Clostridium
50.00%
Clostridiales
50.00%
Clostridia
50.00%
Firmicutes
50.00%
Bacteria
50.00%
NECEvent2014_8_1_scaffold_1199
3987 bp | 30.70 x | 29.47%
0.960873
Clostridium colic...
66.67%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_2843
1661 bp | 14.00 x | 27.09%
0.960867
Clostridium sp. M...
50.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1169
4054 bp | 20.50 x | 28.17%
0.953873
Clostridium sacch...
40.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_3648
1277 bp | 11.51 x | 23.02%
0.951449
Clostridium sarta...
100.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_260
14060 bp | 31.62 x | 28.80%
0.947155
Clostridium celatum
15.38%
Clostridium
69.23%
Clostridiales
84.62%
Clostridia
84.62%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_91
27967 bp | 37.59 x | 29.32%
0.944828
Clostridium baratii
38.24%
Clostridium
85.29%
Clostridiales
85.29%
Clostridia
85.29%
Firmicutes
85.29%
Bacteria
85.29%
NECEvent2014_8_1_scaffold_93
27654 bp | 36.93 x | 29.79%
0.944673
Clostridium baratii
20.00%
Clostridium
93.33%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_192
17271 bp | 53.94 x | 31.10%
0.943547
Clostridium baratii
78.57%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_2380
1968 bp | 13.87 x | 27.85%
0.942073
Clostridium sp. I...
50.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_259
14223 bp | 36.91 x | 29.09%
0.941784
Clostridium sp. 7...
35.71%
Clostridium
78.57%
Clostridiales
85.71%
Clostridia
85.71%
Firmicutes
92.86%
Bacteria
92.86%
NECEvent2014_8_1_scaffold_193
17216 bp | 32.40 x | 29.02%
0.941159
Clostridium celatum
23.08%
Clostridium
92.31%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_856
5434 bp | 26.39 x | 28.23%
0.939639
Caloramator austr...
33.33%
Caloramator
33.33%
Clostridiales
66.67%
Clostridia
66.67%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_16
72650 bp | 52.64 x | 30.88%
0.939436
Clostridium botul...
21.43%
Clostridium
98.57%
Clostridiales
98.57%
Clostridia
98.57%
Firmicutes
98.57%
Bacteria
98.57%
NECEvent2014_8_1_scaffold_2571
1831 bp | 70.13 x | 27.14%
0.938831
Clostridium butyr...
50.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_1582
2998 bp | 19.96 x | 27.65%
0.938626
unknown
33.33%
Clostridium
66.67%
Clostridiales
66.67%
Clostridia
66.67%
Firmicutes
66.67%
Bacteria
66.67%
NECEvent2014_8_1_scaffold_188
17506 bp | 38.14 x | 31.05%
0.938078
Clostridium tetan...
39.13%
Clostridium
91.30%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_3487
1340 bp | 10.30 x | 26.42%
0.93806
Clostridium sacch...
50.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_3901
1188 bp | 17.17 x | 25.93%
0.936869
Clostridium sp. 7...
100.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_348
11431 bp | 30.99 x | 29.68%
0.936139
Clostridium baratii
33.33%
Clostridium
83.33%
Clostridiales
91.67%
Clostridia
91.67%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_753
6206 bp | 28.50 x | 28.88%
0.935385
Clostridium baratii
28.57%
Clostridium
71.43%
Clostridiales
85.71%
Clostridia
85.71%
Firmicutes
85.71%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_135
21313 bp | 46.34 x | 29.98%
0.935204
Clostridium celatum
15.38%
Clostridium
61.54%
Clostridiales
76.92%
Clostridia
76.92%
Firmicutes
92.31%
Bacteria
92.31%
NECEvent2014_8_1_scaffold_56
38987 bp | 46.98 x | 30.13%
0.932311
Clostridium botul...
20.59%
Clostridium
76.47%
Clostridiales
85.29%
Clostridia
88.24%
Firmicutes
91.18%
Bacteria
94.12%
NECEvent2014_8_1_scaffold_351
11355 bp | 50.74 x | 31.05%
0.9321
Clostridium celatum
25.00%
Clostridium
100.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_175
18169 bp | 47.43 x | 31.41%
0.930431
Clostridium botul...
23.81%
Clostridium
76.19%
Clostridiales
76.19%
Clostridia
76.19%
Firmicutes
80.95%
Bacteria
80.95%
NECEvent2014_8_1_scaffold_570
7834 bp | 55.16 x | 31.02%
0.92941
Clostridium borni...
25.00%
Clostridium
75.00%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
NECEvent2014_8_1_scaffold_222
15575 bp | 33.53 x | 29.79%
0.928604
Clostridium baratii
25.00%
Clostridium
91.67%
Clostridiales
91.67%
Clostridia
91.67%
Firmicutes
91.67%
Bacteria
91.67%
NECEvent2014_8_1_scaffold_367
11050 bp | 42.11 x | 29.13%
0.928507
Clostridium baratii
40.00%
Clostridium
90.00%
Clostridiales
90.00%
Clostridia
90.00%
Firmicutes
90.00%
Bacteria
90.00%
NECEvent2014_8_1_scaffold_405
10040 bp | 31.54 x | 29.38%
0.927191
Clostridium baratii
33.33%
Clostridium
75.00%
Clostridiales
75.00%
Clostridia
75.00%
Firmicutes
91.67%
Bacteria
91.67%
NECEvent2014_8_1_scaffold_269
13818 bp | 40.12 x | 29.35%
0.926183
Lachnospiraceae b...
12.50%
Clostridium
50.00%
Clostridiales
62.50%
Clostridia
62.50%
Firmicutes
75.00%
Bacteria
87.50%
NECEvent2014_8_1_scaffold_1726
2754 bp | 19.88 x | 28.29%
0.925926
Clostridium sulfi...
33.33%
Clostridium
66.67%
Clostridiales
66.67%
Clostridia
66.67%
Firmicutes
66.67%
Bacteria
66.67%
NECEvent2014_8_1_scaffold_718
6493 bp | 38.23 x | 29.42%
0.92592
Clostridium celatum
33.33%
Clostridium
88.89%
Clostridiales
88.89%
Clostridia
88.89%
Firmicutes
88.89%
Bacteria
88.89%
NECEvent2014_8_1_scaffold_227
15377 bp | 29.63 x | 28.69%
0.925733
Clostridium sp. 7...
35.29%
Clostridium
94.12%
Clostridiales
100.00%
Clostridia
100.00%
Firmicutes
100.00%
Bacteria
100.00%
Displaying items 1-50 of 233 in total