ggKbase home page

NECEvent2014_8_1_scaffold_321

Alias: 178_001_scaffold_321

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_321_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..350)
DNA (348bp) protein (116aa)
ABC transporter integral membrane protein n=3 Tax=Clostridium butyricum RepID=B1QYW1_CLOBU
Inner-membrane translocator {ECO:0000313|EMBL:EEP53960.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. B
ABC-type uncharacterized transport system, permease component
NECEvent2014_8_1_scaffold_321_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(350..1366)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AT31_CLOBU rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD15588.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
hypothetical protein
NECEvent2014_8_1_scaffold_321_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1765..2178)
DNA (414bp) protein (138aa)
HutP superfamily n=4 Tax=Clostridium butyricum RepID=B1QYW3_CLOBU
L-lactate dehydrogenase (FMN-dependent) {ECO:0000313|EMBL:KJZ83068.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
HutP superfamily
NECEvent2014_8_1_scaffold_321_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2299..3117)
DNA (819bp) protein (273aa)
accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=4 Tax=Clostridium butyricum RepID=B1QYW4_CLOBU rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
NECEvent2014_8_1_scaffold_321_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3110..4003)
DNA (894bp) protein (298aa)
accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=3 Tax=Clostridium butyricum RepID=B1QYW5_CLOBU rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
NECEvent2014_8_1_scaffold_321_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3996..5348)
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KHD15592.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KHD15592.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
accC; biotin carboxylase (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Clostridium butyricum RepID=M8K4Q8_CLOBU rbh
NECEvent2014_8_1_scaffold_321_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5357..5785)
DNA (429bp) protein (143aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC:4.2.1.59)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridium butyricum RepID=B1QYW7_CLOBU
NECEvent2014_8_1_scaffold_321_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5789..6295)
DNA (507bp) protein (169aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHR9_CLOBU rbh
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ENZ35913.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB
NECEvent2014_8_1_scaffold_321_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6317..7549)
DNA (1233bp) protein (411aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Clostridium butyricum RepID=B1QYW9_CLOBU rbh
NECEvent2014_8_1_scaffold_321_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7565..8305)
DNA (741bp) protein (247aa)
3-oxoacyl-acyl-carrier protein reductase {ECO:0000313|EMBL:KJZ94795.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJZ94795.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=4 Tax=Clostridium butyricum RepID=B1QYX0_CLOBU rbh
NECEvent2014_8_1_scaffold_321_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8435..9373)
DNA (939bp) protein (313aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
fabD; malonyl CoA-acyl carrier protein transacylase FabD (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=4 Tax=Clostridium butyricum RepID=B1QYX1_CLOBU rbh
NECEvent2014_8_1_scaffold_321_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9366..10307)
DNA (942bp) protein (314aa)
fabI; enoyl-[acyl-carrier protein] reductase FabI (EC:1.3.1.9)
Enoyl-ACP reductase II n=4 Tax=Clostridium butyricum RepID=R0AT19_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84516.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_1_scaffold_321_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10398..10622)
DNA (225bp) protein (75aa)
Acyl carrier protein n=3 Tax=Clostridium butyricum RepID=C4IHP1_CLOBU
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridial
acpP1; acyl carrier protein AcpP
NECEvent2014_8_1_scaffold_321_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10721..11692)
DNA (972bp) protein (324aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
fabH1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J945_CLOBU rbh
NECEvent2014_8_1_scaffold_321_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11711..12205)
DNA (495bp) protein (165aa)
L-asparaginase {ECO:0000313|EMBL:KJZ84605.1}; EC=3.5.1.1 {ECO:0000313|EMBL:KJZ84605.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Transcriptional regulator, MarR family n=5 Tax=Clostridium butyricum RepID=B1QYD6_CLOBU
transcriptional regulator, MarR family
Displaying 15 items

View Taxonomy