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NECEvent2014_8_1_scaffold_384

Alias: 178_001_scaffold_384

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_384_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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129..1388
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
secD; protein translocase subunit SecD
NECEvent2014_8_1_scaffold_384_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1381..2250
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA31_CLOBU rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
secF; protein translocase subunit SecF
NECEvent2014_8_1_scaffold_384_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2381..3259
DNA (879bp) protein (293aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Phosphoesterase, RecJ domain protein n=2 Tax=Clostridium butyricum RepID=C4IKU0_CLOBU rbh
Phosphoesterase, RecJ domain protein {ECO:0000313|EMBL:EEP53743.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
NECEvent2014_8_1_scaffold_384_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3386..3904
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTX4_CLOBU rbh
NECEvent2014_8_1_scaffold_384_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4089..6302
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:KJZ83633.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJZ83633.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Clostridium butyricum RepID=C4IKU2_CLOBU rbh
NECEvent2014_8_1_scaffold_384_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6368..6817
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKG6_CLOBU
NECEvent2014_8_1_scaffold_384_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6920..7519
DNA (600bp) protein (200aa)
Metallo-beta-lactamase family protein n=4 Tax=Clostridium butyricum RepID=B1R2Q4_CLOBU rbh
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:EEP54342.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
metallo-beta-lactamase family protein
NECEvent2014_8_1_scaffold_384_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7681..9108
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:EEP54134.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEP54134.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase 2 n=3 Tax=Clostridium butyricum RepID=B1R2Q5_CLOBU rbh
NECEvent2014_8_1_scaffold_384_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9248..10507
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=3 Tax=Clostridium butyricum RepID=B1R2Q6_CLOBU rbh
Displaying 9 items

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