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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_1395 178_001_scaffold_1395
Species: Clostridium butyricum (83.33%)
6 3437 bp 29.65 12.74 96.19
NECEvent2014_8_1_scaffold_906 178_001_scaffold_906
Species: Clostridium butyricum (50%)
6 5179 bp 29.99 14.66 90.71
NECEvent2014_8_1_scaffold_913 178_001_scaffold_913
Species: Clostridium butyricum (50%)
6 5128 bp 29.58 19.07 88.57
NECEvent2014_8_1_scaffold_920 178_001_scaffold_920
Species: Clostridium sp. IBUN125C (50%)
6 5081 bp 30.60 16.80 83.96
NECEvent2014_8_1_scaffold_672 178_001_scaffold_672
Genus: Clostridium (100%)
6 6823 bp 30.57 23.94 97.00
NECEvent2014_8_1_scaffold_675 178_001_scaffold_675
Genus: Clostridium (100%)
6 6804 bp 29.60 11.84 80.29
NECEvent2014_8_1_scaffold_679 178_001_scaffold_679
Species: Clostridium sp. IBUN125C (50%)
6 6771 bp 29.85 15.64 86.40
NECEvent2014_8_1_scaffold_681 178_001_scaffold_681
Species: Clostridium butyricum (50%)
6 6762 bp 28.50 16.73 94.81
NECEvent2014_8_1_scaffold_683 178_001_scaffold_683
Species: Clostridium butyricum (66.67%)
6 6736 bp 31.90 21.02 87.02
NECEvent2014_8_1_scaffold_430 178_001_scaffold_430
Genus: Clostridium (100%)
6 9672 bp 30.47 18.77 90.51
NECEvent2014_8_1_scaffold_943 178_001_scaffold_943
Species: Clostridium butyricum (50%)
6 4954 bp 28.40 15.08 88.60
NECEvent2014_8_1_scaffold_953 178_001_scaffold_953
Genus: Clostridium (66.67%)
6 4902 bp 26.36 14.63 76.01
NECEvent2014_8_1_scaffold_698 178_001_scaffold_698
Species: Clostridium butyricum (50%)
6 6623 bp 30.85 23.26 84.70
NECEvent2014_8_1_scaffold_1225 178_001_scaffold_1225
Species: Clostridium butyricum (50%)
6 3908 bp 28.25 16.01 76.54
NECEvent2014_8_1_scaffold_717 178_001_scaffold_717
Species: Clostridium butyricum (50%)
6 6496 bp 30.42 14.96 85.07
NECEvent2014_8_1_scaffold_462 178_001_scaffold_462
Species: Clostridium butyricum (50%)
6 9196 bp 31.40 25.58 91.12
NECEvent2014_8_1_scaffold_1748 178_001_scaffold_1748
Species: Clostridium butyricum (83.33%)
6 2710 bp 31.40 25.41 86.24
NECEvent2014_8_1_scaffold_476 178_001_scaffold_476
Species: Clostridium butyricum (66.67%)
6 9021 bp 29.87 19.42 93.02
NECEvent2014_8_1_scaffold_735 178_001_scaffold_735
Species: Clostridium butyricum (83.33%)
6 6368 bp 31.36 19.95 92.05
NECEvent2014_8_1_scaffold_739 178_001_scaffold_739
Species: Clostridium sp. IBUN125C (83.33%)
6 6353 bp 27.69 12.32 83.02
NECEvent2014_8_1_scaffold_740 178_001_scaffold_740
Genus: Clostridium (83.33%)
6 6350 bp 30.88 25.96 86.36
NECEvent2014_8_1_scaffold_743 178_001_scaffold_743
Species: Clostridium butyricum (66.67%)
6 6301 bp 28.66 12.52 85.32
NECEvent2014_8_1_scaffold_1514 178_001_scaffold_1514
Species: Clostridium butyricum (50%)
6 3149 bp 28.96 15.20 98.41
NECEvent2014_8_1_scaffold_508 178_001_scaffold_508
Species: Clostridium butyricum (66.67%)
6 8653 bp 29.23 17.72 94.16
NECEvent2014_8_1_scaffold_765 178_001_scaffold_765
Genus: Clostridium (100%)
6 6110 bp 29.39 14.90 98.94
NECEvent2014_8_1_scaffold_767 178_001_scaffold_767
Species: Clostridium sp. IBUN125C (50%)
6 6108 bp 30.37 14.10 93.12
NECEvent2014_8_1_scaffold_1281 178_001_scaffold_1281
Species: Clostridium sp. IBUN125C (50%)
6 3742 bp 29.37 16.44 87.79
NECEvent2014_8_1_scaffold_1300 178_001_scaffold_1300
Genus: Clostridium (100%)
5 3673 bp 29.81 11.27 68.36
NECEvent2014_8_1_scaffold_1045 178_001_scaffold_1045
Species: Clostridium butyricum (80%)
5 4482 bp 28.45 12.52 91.10
NECEvent2014_8_1_scaffold_1301 178_001_scaffold_1301
Species: Clostridium butyricum (60%)
5 3673 bp 28.78 10.25 84.21
NECEvent2014_8_1_scaffold_1814 178_001_scaffold_1814
Genus: Clostridium (100%)
5 2628 bp 27.55 8.79 89.38
NECEvent2014_8_1_scaffold_792 178_001_scaffold_792
Species: Clostridium butyricum (80%)
5 5889 bp 31.19 22.06 93.53
NECEvent2014_8_1_scaffold_1048 178_001_scaffold_1048
Genus: Clostridium (100%)
5 4468 bp 29.66 16.45 90.44
NECEvent2014_8_1_scaffold_793 178_001_scaffold_793
Genus: Clostridium (100%)
5 5875 bp 31.51 28.01 85.58
NECEvent2014_8_1_scaffold_795 178_001_scaffold_795
Genus: Clostridium (100%)
5 5856 bp 31.22 18.16 78.33
NECEvent2014_8_1_scaffold_1062 178_001_scaffold_1062
Genus: Clostridium (100%)
5 4415 bp 31.73 12.37 99.34
NECEvent2014_8_1_scaffold_1318 178_001_scaffold_1318
Species: Clostridium butyricum (80%)
5 3632 bp 30.01 14.00 92.76
NECEvent2014_8_1_scaffold_807 178_001_scaffold_807
Genus: Clostridium (100%)
5 5775 bp 29.02 18.81 91.01
NECEvent2014_8_1_scaffold_809 178_001_scaffold_809
Species: Clostridium butyricum (60%)
5 5765 bp 29.78 17.22 90.91
NECEvent2014_8_1_scaffold_816 178_001_scaffold_816
Genus: Clostridium (100%)
5 5708 bp 29.47 16.08 90.71
NECEvent2014_8_1_scaffold_563 178_001_scaffold_563
Species: Clostridium sp. IBUN125C (80%)
5 7973 bp 28.30 15.52 92.34
NECEvent2014_8_1_scaffold_569 178_001_scaffold_569
Species: Clostridium butyricum (100%)
5 7835 bp 32.30 32.66 83.70
NECEvent2014_8_1_scaffold_838 178_001_scaffold_838
Species: Clostridium butyricum (60%)
5 5565 bp 29.81 20.08 91.16
NECEvent2014_8_1_scaffold_1606 178_001_scaffold_1606
Genus: Clostridium (100%)
5 2954 bp 27.86 11.78 95.97
NECEvent2014_8_1_scaffold_1866 178_001_scaffold_1866
Genus: Clostridium (80%)
5 2550 bp 27.18 11.06 69.76
NECEvent2014_8_1_scaffold_2890 178_001_scaffold_2890
Species: Clostridium sp. IBUN13A (60%)
5 1633 bp 26.64 8.45 93.88
NECEvent2014_8_1_scaffold_1611 178_001_scaffold_1611
Species: Clostridium sp. IBUN22A (60%)
5 2944 bp 29.89 16.51 84.68
NECEvent2014_8_1_scaffold_2891 178_001_scaffold_2891 5 1633 bp 28.17 27.28 73.73
NECEvent2014_8_1_scaffold_844 178_001_scaffold_844
Species: Clostridium sp. IBUN125C (60%)
5 5490 bp 28.78 15.03 92.19
NECEvent2014_8_1_scaffold_1100 178_001_scaffold_1100
Species: Clostridium sp. IBUN125C (60%)
5 4267 bp 28.52 14.17 87.74
Displaying items 101-150 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.