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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_857 178_001_scaffold_857
Species: Clostridium sp. IBUN13A (60%)
5 5432 bp 28.85 11.43 90.52
NECEvent2014_8_1_scaffold_1371 178_001_scaffold_1371
Genus: Clostridium (100%)
5 3504 bp 28.65 11.60 87.59
NECEvent2014_8_1_scaffold_607 178_001_scaffold_607
Genus: Clostridium (100%)
5 7430 bp 31.13 22.29 89.52
NECEvent2014_8_1_scaffold_1637 178_001_scaffold_1637
Species: Clostridium sp. IBUN125C (60%)
5 2906 bp 27.49 9.50 91.26
NECEvent2014_8_1_scaffold_871 178_001_scaffold_871
Species: Clostridium butyricum (60%)
5 5355 bp 29.93 16.19 90.59
NECEvent2014_8_1_scaffold_873 178_001_scaffold_873
Species: Clostridium butyricum (60%)
5 5347 bp 31.38 31.53 91.00
NECEvent2014_8_1_scaffold_1131 178_001_scaffold_1131
Species: Clostridium butyricum (80%)
5 4172 bp 30.49 19.20 95.64
NECEvent2014_8_1_scaffold_877 178_001_scaffold_877
Species: Clostridium butyricum (60%)
5 5329 bp 29.59 18.75 95.65
NECEvent2014_8_1_scaffold_1133 178_001_scaffold_1133
Species: Clostridium butyricum (80%)
5 4171 bp 30.78 15.54 91.99
NECEvent2014_8_1_scaffold_1404 178_001_scaffold_1404
Genus: Clostridium (100%)
5 3406 bp 29.45 22.24 88.70
NECEvent2014_8_1_scaffold_893 178_001_scaffold_893
Species: Clostridium butyricum (80%)
5 5248 bp 27.23 11.49 90.66
NECEvent2014_8_1_scaffold_1415 178_001_scaffold_1415
Species: Clostridium butyricum (60%)
5 3365 bp 29.57 17.92 88.53
NECEvent2014_8_1_scaffold_394 178_001_scaffold_394
Species: Clostridium sp. IBUN125C (60%)
5 10232 bp 31.59 24.86 91.48
NECEvent2014_8_1_scaffold_1420 178_001_scaffold_1420
Species: Clostridium butyricum (60%)
5 3359 bp 26.26 9.02 87.79
NECEvent2014_8_1_scaffold_917 178_001_scaffold_917
Species: Clostridium butyricum (60%)
5 5107 bp 32.86 39.15 89.35
NECEvent2014_8_1_scaffold_918 178_001_scaffold_918
Species: Clostridium butyricum (80%)
5 5095 bp 29.89 15.90 86.73
NECEvent2014_8_1_scaffold_666 178_001_scaffold_666
Species: Clostridium butyricum (60%)
5 6854 bp 29.09 23.72 84.43
NECEvent2014_8_1_scaffold_1179 178_001_scaffold_1179
Species: Clostridium butyricum (80%)
5 4029 bp 28.32 10.54 94.42
NECEvent2014_8_1_scaffold_1185 178_001_scaffold_1185
Species: Clostridium butyricum (60%)
5 4016 bp 30.30 16.81 85.83
NECEvent2014_8_1_scaffold_1445 178_001_scaffold_1445
Genus: Clostridium (80%)
5 3302 bp 26.35 9.09 86.77
NECEvent2014_8_1_scaffold_1190 178_001_scaffold_1190
Species: Clostridium butyricum (80%)
5 4004 bp 31.24 20.38 91.26
NECEvent2014_8_1_scaffold_936 178_001_scaffold_936
Genus: Clostridium (80%)
5 4997 bp 29.70 19.27 84.65
NECEvent2014_8_1_scaffold_1192 178_001_scaffold_1192
Genus: Clostridium (100%)
5 4000 bp 29.48 22.54 78.83
NECEvent2014_8_1_scaffold_1728 178_001_scaffold_1728
Genus: Clostridium (80%)
5 2754 bp 28.00 6.86 90.74
NECEvent2014_8_1_scaffold_1219 178_001_scaffold_1219
Species: Clostridium butyricum (60%)
5 3932 bp 28.66 11.90 77.06
NECEvent2014_8_1_scaffold_1481 178_001_scaffold_1481
Genus: Clostridium (80%)
5 3228 bp 30.76 15.06 92.66
NECEvent2014_8_1_scaffold_1998 178_001_scaffold_1998
Genus: Clostridium (100%)
5 4047 bp 31.08 26.32 86.14
NECEvent2014_8_1_scaffold_720 178_001_scaffold_720
Species: Clostridium butyricum (60%)
5 6471 bp 29.73 15.11 81.55
NECEvent2014_8_1_scaffold_723 178_001_scaffold_723
Species: Clostridium butyricum (60%)
5 6448 bp 30.60 18.45 96.08
NECEvent2014_8_1_scaffold_728 178_001_scaffold_728
Species: Clostridium butyricum (80%)
5 6410 bp 28.83 17.95 87.10
NECEvent2014_8_1_scaffold_985 178_001_scaffold_985
Genus: Clostridium (60%)
5 4724 bp 29.59 23.91 83.83
NECEvent2014_8_1_scaffold_1241 178_001_scaffold_1241
Species: Clostridium butyricum (100%)
5 3866 bp 29.33 10.09 86.06
NECEvent2014_8_1_scaffold_731 178_001_scaffold_731
Species: Clostridium butyricum (80%)
5 6384 bp 28.79 19.60 92.39
NECEvent2014_8_1_scaffold_732 178_001_scaffold_732
Species: Clostridium butyricum (60%)
5 6377 bp 30.42 20.06 83.46
NECEvent2014_8_1_scaffold_2016 178_001_scaffold_2016
Species: Clostridium butyricum (60%)
5 2357 bp 29.40 26.86 72.85
NECEvent2014_8_1_scaffold_738 178_001_scaffold_738
Species: Clostridium butyricum (60%)
5 6353 bp 28.38 18.46 80.89
NECEvent2014_8_1_scaffold_741 178_001_scaffold_741
Genus: Clostridium (100%)
5 6330 bp 30.33 23.84 89.05
NECEvent2014_8_1_scaffold_745 178_001_scaffold_745
Species: Clostridium butyricum (60%)
5 6272 bp 30.37 20.21 89.35
NECEvent2014_8_1_scaffold_1004 178_001_scaffold_1004
Species: Clostridium butyricum (60%)
5 4621 bp 27.81 13.05 92.38
NECEvent2014_8_1_scaffold_1006 178_001_scaffold_1006
Species: Clostridium butyricum (60%)
5 4614 bp 30.34 14.99 85.31
NECEvent2014_8_1_scaffold_1518 178_001_scaffold_1518
Species: Clostridium sp. IBUN125C (60%)
5 3145 bp 28.55 8.87 87.95
NECEvent2014_8_1_scaffold_1018 178_001_scaffold_1018
Species: Clostridium butyricum (80%)
5 4557 bp 28.81 16.19 93.68
NECEvent2014_8_1_scaffold_766 178_001_scaffold_766
Species: Clostridium sp. IBUN125C (80%)
5 6109 bp 28.37 18.10 73.37
NECEvent2014_8_1_scaffold_775 178_001_scaffold_775
Species: Clostridium butyricum (60%)
5 6054 bp 30.48 23.09 91.48
NECEvent2014_8_1_scaffold_1032 178_001_scaffold_1032
Species: Clostridium butyricum (100%)
5 4527 bp 29.25 21.37 91.05
NECEvent2014_8_1_scaffold_1288 178_001_scaffold_1288
Species: Clostridium butyricum (60%)
5 3710 bp 32.80 17.06 95.66
NECEvent2014_8_1_scaffold_1296 178_001_scaffold_1296
Species: Clostridium sp. IBUN13A (80%)
5 3685 bp 27.73 10.75 84.02
NECEvent2014_8_1_scaffold_529 178_001_scaffold_529
Genus: Clostridium (80%)
5 8410 bp 30.98 15.20 95.89
NECEvent2014_8_1_scaffold_785 178_001_scaffold_785
Genus: Clostridium (100%)
5 5966 bp 31.58 14.63 88.95
NECEvent2014_8_1_scaffold_1044 178_001_scaffold_1044
Species: Clostridium butyricum (75%)
4 4488 bp 29.14 15.91 96.72
Displaying items 151-200 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.