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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1101-1150 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2229 178_001_scaffold_2229
Species: Clostridium sp. IBUN125C (75%)
4 2122 bp 27.24 6.79 73.09
NECEvent2014_8_1_scaffold_4162 178_001_scaffold_4162
Species: Clostridium sp. IBUN125C (100%)
1 1114 bp 26.30 7.94 72.98
NECEvent2014_8_1_scaffold_2016 178_001_scaffold_2016
Species: Clostridium butyricum (60%)
5 2357 bp 29.40 26.86 72.85
NECEvent2014_8_1_scaffold_2900 178_001_scaffold_2900
Species: human gut metagenome (100%)
1 1628 bp 31.08 18.43 72.79
NECEvent2014_8_1_scaffold_2295 178_001_scaffold_2295
Species: Clostridium sp. IBUN125C (50%)
2 2053 bp 26.89 8.55 72.77
NECEvent2014_8_1_scaffold_3162 178_001_scaffold_3162
Species: Clostridium butyricum (50%)
2 1480 bp 26.49 12.87 72.77
NECEvent2014_8_1_scaffold_891 178_001_scaffold_891
Species: Clostridium sp. IBUN13A (85.71%)
7 5257 bp 28.82 13.18 72.70
NECEvent2014_8_1_scaffold_4061 178_001_scaffold_4061
Species: Clostridium sp. IBUN125C (100%)
1 1144 bp 30.07 28.06 72.64
NECEvent2014_8_1_scaffold_3135 178_001_scaffold_3135
Species: Clostridium sp. IBUN125C (66.67%)
3 1496 bp 24.93 7.82 72.59
NECEvent2014_8_1_scaffold_2414 178_001_scaffold_2414
Species: Clostridium butyricum (100%)
2 1949 bp 29.45 12.01 72.34
NECEvent2014_8_1_scaffold_3618 178_001_scaffold_3618
Genus: Clostridium (100%)
3 1286 bp 26.52 10.26 72.32
NECEvent2014_8_1_scaffold_3066 178_001_scaffold_3066
Species: Clostridium butyricum (100%)
1 1526 bp 30.54 10.62 72.15
NECEvent2014_8_1_scaffold_3724 178_001_scaffold_3724
Species: Clostridium sp. IBUN125C (66.67%)
3 1249 bp 28.34 7.45 72.06
NECEvent2014_8_1_scaffold_2392 178_001_scaffold_2392
Species: Clostridium butyricum (100%)
1 1961 bp 29.47 21.57 72.06
NECEvent2014_8_1_scaffold_3125 178_001_scaffold_3125
Species: Clostridium sp. IBUN125C (66.67%)
3 1500 bp 24.93 12.70 71.80
NECEvent2014_8_1_scaffold_3223 178_001_scaffold_3223
Species: Clostridium butyricum (100%)
1 1451 bp 29.84 22.12 71.54
NECEvent2014_8_1_scaffold_2484 178_001_scaffold_2484
Species: Clostridium sp. IBUN13A (100%)
1 1896 bp 30.27 24.13 71.52
NECEvent2014_8_1_scaffold_3742 178_001_scaffold_3742
Species: Clostridium butyricum (100%)
1 1243 bp 25.99 6.03 71.44
NECEvent2014_8_1_scaffold_2082 178_001_scaffold_2082
Species: Clostridium butyricum (75%)
4 2285 bp 30.07 14.38 71.42
NECEvent2014_8_1_scaffold_3970 178_001_scaffold_3970
Species: Clostridium butyricum (100%)
1 1168 bp 26.11 7.83 71.40
NECEvent2014_8_1_scaffold_1936 178_001_scaffold_1936
Genus: Clostridium (100%)
3 2461 bp 30.07 16.33 71.31
NECEvent2014_8_1_scaffold_1409 178_001_scaffold_1409
Species: Clostridium sp. IBUN125C (50%)
4 3390 bp 30.12 23.14 71.15
NECEvent2014_8_1_scaffold_3244 178_001_scaffold_3244
Species: Clostridium sp. IBUN22A (100%)
1 1444 bp 29.85 27.22 71.05
NECEvent2014_8_1_scaffold_3249 178_001_scaffold_3249
Species: Clostridium sp. IBUN125C (100%)
1 1442 bp 27.74 9.99 70.94
NECEvent2014_8_1_scaffold_4452 178_001_scaffold_4452
Species: Clostridium sp. IBUN125C (100%)
1 1039 bp 29.36 18.77 70.74
NECEvent2014_8_1_scaffold_4422 178_001_scaffold_4422
Species: Clostridium sp. IBUN13A (100%)
1 1048 bp 25.29 8.59 70.42
NECEvent2014_8_1_scaffold_1866 178_001_scaffold_1866
Genus: Clostridium (80%)
5 2550 bp 27.18 11.06 69.76
NECEvent2014_8_1_scaffold_3429 178_001_scaffold_3429
Species: Clostridium butyricum (100%)
1 1364 bp 27.05 8.69 69.72
NECEvent2014_8_1_scaffold_2616 178_001_scaffold_2616
Species: Clostridium butyricum (75%)
4 1801 bp 28.15 9.33 69.63
NECEvent2014_8_1_scaffold_2080 178_001_scaffold_2080
Species: Clostridium sp. IBUN125C (66.67%)
3 2287 bp 27.42 6.89 69.39
NECEvent2014_8_1_scaffold_2886 178_001_scaffold_2886
Species: Clostridium sp. IBUN125C (50%)
4 1635 bp 26.06 7.89 69.36
NECEvent2014_8_1_scaffold_2383 178_001_scaffold_2383
Species: Clostridium sp. IBUN125C (100%)
1 1966 bp 31.79 30.82 68.97
NECEvent2014_8_1_scaffold_2937 178_001_scaffold_2937
Species: Clostridium sp. IBUN125C (50%)
2 1607 bp 29.93 12.13 68.70
NECEvent2014_8_1_scaffold_1652 178_001_scaffold_1652
Species: Clostridium butyricum (66.67%)
3 2879 bp 29.84 18.50 68.57
NECEvent2014_8_1_scaffold_2085 178_001_scaffold_2085
Genus: Clostridium (100%)
3 2281 bp 26.61 8.02 68.52
NECEvent2014_8_1_scaffold_1300 178_001_scaffold_1300
Genus: Clostridium (100%)
5 3673 bp 29.81 11.27 68.36
NECEvent2014_8_1_scaffold_4456 178_001_scaffold_4456
Species: Clostridium butyricum (50%)
2 1039 bp 28.78 8.95 68.14
NECEvent2014_8_1_scaffold_3450 178_001_scaffold_3450
Species: Clostridium sp. IBUN125C (100%)
2 1355 bp 27.82 12.62 67.97
NECEvent2014_8_1_scaffold_4406 178_001_scaffold_4406
Species: Clostridium sp. IBUN125C (100%)
2 1052 bp 28.99 8.27 67.87
NECEvent2014_8_1_scaffold_2969 178_001_scaffold_2969
Species: Clostridium saccharoperbutylacetonicum (50%)
2 1585 bp 29.91 6.06 67.38
NECEvent2014_8_1_scaffold_3231 178_001_scaffold_3231
Species: Clostridium butyricum (100%)
1 1448 bp 28.66 17.40 67.33
NECEvent2014_8_1_scaffold_1877 178_001_scaffold_1877
Species: Clostridium sp. IBUN125C (66.67%)
3 2534 bp 29.12 10.89 66.06
NECEvent2014_8_1_scaffold_3209 178_001_scaffold_3209
Species: Clostridium butyricum (50%)
2 1455 bp 28.32 6.08 65.77
NECEvent2014_8_1_scaffold_2324 178_001_scaffold_2324
Species: Clostridium butyricum (50%)
2 2023 bp 29.71 26.17 65.55
NECEvent2014_8_1_scaffold_3128 178_001_scaffold_3128
Species: Clostridium butyricum (100%)
2 1498 bp 28.70 16.02 65.09
NECEvent2014_8_1_scaffold_1598 178_001_scaffold_1598
Species: Clostridium butyricum (100%)
2 2968 bp 31.03 12.94 64.99
NECEvent2014_8_1_scaffold_2407 178_001_scaffold_2407
Species: Clostridium sp. IBUN125C (100%)
2 1953 bp 27.60 7.53 64.98
NECEvent2014_8_1_scaffold_2011 178_001_scaffold_2011
Species: Clostridium butyricum (50%)
2 2367 bp 28.35 11.66 64.51
NECEvent2014_8_1_scaffold_1541 178_001_scaffold_1541
Species: Clostridium butyricum (50%)
2 3080 bp 29.84 18.80 64.09
NECEvent2014_8_1_scaffold_3104 178_001_scaffold_3104
Species: Clostridium butyricum (50%)
2 1511 bp 28.52 17.27 63.53
Displaying items 1101-1150 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.