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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 351-400 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_1754 178_001_scaffold_1754
Species: Clostridium perfringens (100%)
2 2703 bp 35.26 11.21 95.23
NECEvent2014_8_1_scaffold_4570 178_001_scaffold_4570
Species: Clostridium perfringens (100%)
2 1010 bp 28.22 5.79 70.10
NECEvent2014_8_1_scaffold_2523 178_001_scaffold_2523
Species: Clostridium perfringens (100%)
2 1866 bp 32.42 11.09 91.96
NECEvent2014_8_1_scaffold_3036 178_001_scaffold_3036
Species: Clostridium perfringens (100%)
2 1543 bp 31.04 6.03 97.60
NECEvent2014_8_1_scaffold_3292 178_001_scaffold_3292
Species: Clostridium perfringens (100%)
2 1422 bp 30.66 6.12 98.95
NECEvent2014_8_1_scaffold_4317 178_001_scaffold_4317
Species: Clostridium perfringens (100%)
2 1074 bp 30.63 7.54 92.74
NECEvent2014_8_1_scaffold_2273 178_001_scaffold_2273
Species: Clostridium perfringens (100%)
2 2074 bp 31.73 8.97 95.76
NECEvent2014_8_1_scaffold_4321 178_001_scaffold_4321
Species: Clostridium perfringens (100%)
2 1073 bp 30.48 7.83 85.55
NECEvent2014_8_1_scaffold_4578 178_001_scaffold_4578
Species: Clostridium perfringens (100%)
2 1008 bp 26.19 2.68 94.35
NECEvent2014_8_1_scaffold_4583 178_001_scaffold_4583
Species: Clostridium perfringens (100%)
2 1007 bp 29.49 6.85 98.61
NECEvent2014_8_1_scaffold_2025 178_001_scaffold_2025
Species: Clostridium perfringens (100%)
2 2344 bp 30.93 6.59 97.65
NECEvent2014_8_1_scaffold_3305 178_001_scaffold_3305
Species: Clostridium perfringens (100%)
2 1417 bp 29.22 5.61 87.65
NECEvent2014_8_1_scaffold_1258 178_001_scaffold_1258
Species: Clostridium perfringens (100%)
2 3821 bp 32.01 14.76 90.05
NECEvent2014_8_1_scaffold_1259 178_001_scaffold_1259
Species: Clostridium perfringens (100%)
2 3815 bp 31.19 11.56 93.58
NECEvent2014_8_1_scaffold_4075 178_001_scaffold_4075
Species: Clostridium perfringens (100%)
2 1141 bp 29.71 4.73 87.03
NECEvent2014_8_1_scaffold_3053 178_001_scaffold_3053
Species: Clostridium perfringens (100%)
2 1532 bp 26.96 3.52 95.37
NECEvent2014_8_1_scaffold_4077 178_001_scaffold_4077
Species: Clostridium perfringens (100%)
2 1141 bp 30.15 6.05 100.96
NECEvent2014_8_1_scaffold_4333 178_001_scaffold_4333
Species: Clostridium perfringens (100%)
2 1071 bp 29.23 4.48 94.96
NECEvent2014_8_1_scaffold_2030 178_001_scaffold_2030
Species: Clostridium perfringens (100%)
2 2339 bp 32.15 6.67 95.04
NECEvent2014_8_1_scaffold_2542 178_001_scaffold_2542
Species: Clostridium perfringens (100%)
2 1848 bp 30.41 7.31 97.89
NECEvent2014_8_1_scaffold_2798 178_001_scaffold_2798
Species: Clostridium perfringens (100%)
2 1688 bp 30.33 8.71 91.53
NECEvent2014_8_1_scaffold_3822 178_001_scaffold_3822
Species: Clostridium perfringens (100%)
2 1214 bp 31.38 5.93 99.84
NECEvent2014_8_1_scaffold_4590 178_001_scaffold_4590
Species: Clostridium perfringens (100%)
2 1005 bp 30.35 5.07 99.70
NECEvent2014_8_1_scaffold_2287 178_001_scaffold_2287
Species: Clostridium perfringens (100%)
2 2060 bp 31.75 12.74 96.26
NECEvent2014_8_1_scaffold_2032 178_001_scaffold_2032
Species: Clostridium perfringens (100%)
2 2336 bp 31.42 11.88 93.75
NECEvent2014_8_1_scaffold_3056 178_001_scaffold_3056
Species: Clostridium perfringens (100%)
2 1531 bp 30.37 7.25 97.98
NECEvent2014_8_1_scaffold_4081 178_001_scaffold_4081
Species: Clostridium perfringens (100%)
2 1139 bp 31.87 7.90 98.77
NECEvent2014_8_1_scaffold_2546 178_001_scaffold_2546
Species: Clostridium perfringens (100%)
2 1847 bp 29.56 6.98 87.87
NECEvent2014_8_1_scaffold_2291 178_001_scaffold_2291
Species: Clostridium perfringens (50%)
2 2059 bp 32.64 10.49 56.05
NECEvent2014_8_1_scaffold_1268 178_001_scaffold_1268
Species: Clostridium perfringens (100%)
2 3771 bp 30.97 8.27 97.14
NECEvent2014_8_1_scaffold_1524 178_001_scaffold_1524
Species: Clostridium perfringens (50%)
2 3130 bp 32.40 13.32 93.74
NECEvent2014_8_1_scaffold_3316 178_001_scaffold_3316
Species: Clostridium perfringens (100%)
2 1412 bp 29.82 5.52 66.93
NECEvent2014_8_1_scaffold_2549 178_001_scaffold_2549
Species: Clostridium perfringens (100%)
2 1847 bp 31.24 8.93 98.27
NECEvent2014_8_1_scaffold_2805 178_001_scaffold_2805
Species: Clostridium perfringens (100%)
2 1685 bp 34.12 13.35 92.76
NECEvent2014_8_1_scaffold_3829 178_001_scaffold_3829
Species: Clostridium perfringens (100%)
2 1212 bp 27.56 5.45 84.90
NECEvent2014_8_1_scaffold_4088 178_001_scaffold_4088
Species: Clostridium perfringens (50%)
2 1137 bp 29.73 5.54 99.74
NECEvent2014_8_1_scaffold_1020 178_001_scaffold_1020
Species: Clostridium perfringens (100%)
2 4557 bp 32.76 16.13 96.31
NECEvent2014_8_1_scaffold_4348 178_001_scaffold_4348
Species: Clostridium perfringens (100%)
2 1067 bp 27.37 4.36 83.22
NECEvent2014_8_1_scaffold_1533 178_001_scaffold_1533
Species: Clostridium perfringens (100%)
2 3097 bp 31.39 7.94 91.93
NECEvent2014_8_1_scaffold_3838 178_001_scaffold_3838
Species: Clostridium perfringens (100%)
2 1210 bp 30.25 4.46 97.93
NECEvent2014_8_1_scaffold_3583 178_001_scaffold_3583
Species: Clostridium perfringens (50%)
2 1299 bp 30.48 8.55 73.67
NECEvent2014_8_1_scaffold_2305 178_001_scaffold_2305
Species: Clostridium perfringens (100%)
2 2040 bp 32.06 9.56 94.26
NECEvent2014_8_1_scaffold_3329 178_001_scaffold_3329
Species: Clostridium perfringens (100%)
2 1405 bp 28.83 5.98 90.32
NECEvent2014_8_1_scaffold_3074 178_001_scaffold_3074
Species: Clostridium perfringens (100%)
2 1524 bp 27.03 5.61 94.29
NECEvent2014_8_1_scaffold_3842 178_001_scaffold_3842
Species: Clostridium perfringens (100%)
2 1209 bp 31.60 14.14 98.51
NECEvent2014_8_1_scaffold_4610 178_001_scaffold_4610
Species: Clostridium perfringens (100%)
2 1000 bp 29.70 6.60 100.80
NECEvent2014_8_1_scaffold_4355 178_001_scaffold_4355
Species: Clostridium perfringens (100%)
2 1065 bp 32.02 9.01 83.94
NECEvent2014_8_1_scaffold_3076 178_001_scaffold_3076
Species: Clostridium perfringens (100%)
2 1523 bp 28.43 5.91 80.56
NECEvent2014_8_1_scaffold_4100 178_001_scaffold_4100
Species: Clostridium perfringens (100%)
2 1135 bp 32.42 15.20 95.68
NECEvent2014_8_1_scaffold_3589 178_001_scaffold_3589
Species: Clostridium perfringens (100%)
2 1297 bp 29.68 4.39 93.68
Displaying items 351-400 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.