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NECEvent2014_8_1_scaffold_251

Alias: 178_001_scaffold_251

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_1_scaffold_251_1
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..465
DNA (465bp) protein (155aa)
Oxidoreductase, aldo/keto reductase family n=6 Tax=Klebsiella RepID=B5XUG5_KLEP3
oxidoreductase
Aldo/keto reductase {ECO:0000313|EMBL:ADC56683.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicol
NECEvent2014_8_1_scaffold_251_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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498..1301
DNA (804bp) protein (268aa)
Carboxymuconolactone decarboxylase n=1 Tax=Klebsiella variicola (strain At-22) RepID=D3RHK0_KLEVT rbh
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EWD78488.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="K
4-carboxymuconolactone decarboxylase
NECEvent2014_8_1_scaffold_251_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1659..2588)
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae MGH 20 RepID=V3R232_KLEPN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EWD78489.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="
LysR family transcriptional regulator
NECEvent2014_8_1_scaffold_251_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2718..4106
DNA (1389bp) protein (463aa)
Transporter, major facilitator family n=1 Tax=Klebsiella pneumoniae (strain 342) RepID=B5XUG2_KLEP3 rbh
MFS transporter, DHA2 family, multidrug resistance protein {ECO:0000313|EMBL:EWD78490.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; K
transporter rbh
NECEvent2014_8_1_scaffold_251_trna_1
unknown

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comp(4333..4403)
DNA (71bp)
transferRNA
NECEvent2014_8_1_scaffold_251_5
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4484..5197)
DNA (714bp) protein (238aa)
M23 peptidase domain protein n=5 Tax=Klebsiella RepID=B5XUF6_KLEP3 rbh
hypothetical protein
M23 peptidase domain protein {ECO:0000313|EMBL:CCZ99790.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental sampl
NECEvent2014_8_1_scaffold_251_6
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5511..6065
DNA (555bp) protein (185aa)
isopentenyl-diphosphate delta-isomerase, type 1 (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {E
Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Klebsiella RepID=IDI_KLEP3 rbh
NECEvent2014_8_1_scaffold_251_7
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6296..7813)
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=6 Tax=Klebsiella RepID=B5XUF4_KLEP3 rbh
lysyl-tRNA synthetase
NECEvent2014_8_1_scaffold_251_8
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7823..8722)
DNA (900bp) protein (300aa)
Peptide chain release factor 2 n=6 Tax=Klebsiella RepID=D6GIZ0_9ENTR rbh
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=640131 species="Bacteria; Proteobacteria; Gammapro
NECEvent2014_8_1_scaffold_251_9
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9007..10740)
DNA (1734bp) protein (578aa)
Single-stranded-DNA-specific exonuclease RecJ n=4 Tax=Klebsiella RepID=D3RHJ3_KLEVT rbh
single-stranded-DNA-specific exonuclease RecJ
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ADC56675.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" s
NECEvent2014_8_1_scaffold_251_10
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10746..11459)
DNA (714bp) protein (238aa)
DsbC protein {ECO:0000313|EMBL:CEP33397.1}; EC=5.3.4.1 {ECO:0000313|EMBL:CEP33397.1};; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebs
Disulphide bond isomerase, DsbC/G-like protein n=6 Tax=Klebsiella RepID=D3RHJ2_KLEVT rbh
protein-disulfide isomerase
NECEvent2014_8_1_scaffold_251_11
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11482..12378)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD n=6 Tax=Klebsiella RepID=B5XUF0_KLEP3 rbh
xerD; site-specific tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiell
NECEvent2014_8_1_scaffold_251_12
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12479..13000
DNA (522bp) protein (174aa)
Flavodoxin n=8 Tax=Klebsiella RepID=B5XUE9_KLEP3 rbh
flavodoxin FldB
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Kl
NECEvent2014_8_1_scaffold_251_13
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13007..13417)
DNA (411bp) protein (137aa)
Uncharacterized protein n=141 Tax=Bacteria RepID=B5XUE8_KLEP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESM60977.1}; TaxID=1328376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
NECEvent2014_8_1_scaffold_251_14
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13398..13664)
DNA (267bp) protein (89aa)
TPR repeat protein n=147 Tax=Bacteria RepID=B5XUE7_KLEP3
hypothetical protein
YgfY COG2938 {ECO:0000313|EMBL:CDL14646.1}; TaxID=1432553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS4
NECEvent2014_8_1_scaffold_251_15
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13910..14413
DNA (504bp) protein (168aa)
tRNA-modifying protein YgfZ n=3 Tax=Klebsiella RepID=D6GIZ7_9ENTR
folate-binding protein YgfZ
tRNA-modifying protein YgfZ {ECO:0000256|HAMAP-Rule:MF_01175, ECO:0000256|SAAS:SAAS00010408}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
Displaying 16 items

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