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NECEvent2014_8_2_scaffold_106

Alias: 178_002_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_106_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(164..772)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70732.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative membrane protein
NECEvent2014_8_2_scaffold_106_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(825..1808)
DNA (984bp) protein (328aa)
gluP2; rhomboid protease GluP (EC:3.4.21.105)
Rhomboid protease GluP {ECO:0000313|EMBL:AGF58360.1}; EC=3.4.21.105 {ECO:0000313|EMBL:AGF58360.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Rhomboid protease GluP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYL0_9CLOT
NECEvent2014_8_2_scaffold_106_3
unknown

Not on your lists

1887..3422
DNA (1536bp) protein (512aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_106_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3534..4883
DNA (1350bp) protein (450aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVR9_9CLOT rbh
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EKQ51022.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
radical SAM domain-containing protein
NECEvent2014_8_2_scaffold_106_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4887..5621
DNA (735bp) protein (245aa)
Putative DNA metabolism protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXP3_9CLOT
Putative DNA metabolism protein {ECO:0000313|EMBL:EKQ51023.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
hypothetical protein
NECEvent2014_8_2_scaffold_106_6
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5684..6133
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I6K4_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL74896.1}; Flags: Precursor;; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
NECEvent2014_8_2_scaffold_106_7
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6148..6369
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5S342_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY78254.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10
NECEvent2014_8_2_scaffold_106_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6381..6524
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EP68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01075.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_8_2_scaffold_106_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6559..6993)
DNA (435bp) protein (145aa)
18 kDa heat shock protein Hsp n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPE3_CLOSA
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:CDM69831.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_8_2_scaffold_106_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7010..7441)
DNA (432bp) protein (144aa)
18 kDa heat shock protein Hsp n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPE3_CLOSA
hsp; 18 kDa heat shock protein Hsp
18 kDa heat shock protein Hsp {ECO:0000313|EMBL:AGX41317.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicu
NECEvent2014_8_2_scaffold_106_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7844..8032)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT48_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42622.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_2_scaffold_106_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8164..10086)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GNG5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB15697.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_8_2_scaffold_106_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10286..10627)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU41_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85333.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_2_scaffold_106_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10700..11599)
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ALL3_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68161.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_8_2_scaffold_106_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11768..12904)
DNA (1137bp) protein (379aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ4_9CLOT rbh
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:EKY27402.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatu
hypothetical protein
NECEvent2014_8_2_scaffold_106_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13005..14801)
DNA (1797bp) protein (599aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNF5_9CLOT rbh
Oligoendopeptidase F {ECO:0000313|EMBL:EKY29451.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_8_2_scaffold_106_17
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14847..15245)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01217.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_8_2_scaffold_106_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15464..15859
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01544.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_8_2_scaffold_106_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15984..16658
DNA (675bp) protein (225aa)
zinc import ATP-binding protein ZnuC (EC:3.6.3.-)
Putative metal ion ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPY8_CLOBO
Putative metal ion ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES48923.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_8_2_scaffold_106_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16661..17452
DNA (792bp) protein (264aa)
Putative metal ion ABC transporter, permease protein n=2 Tax=Clostridium botulinum B RepID=B2TLC4_CLOBB
high-affinity Zinc uptake system membrane protein ZnuB
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CDH89695.1}; Putative metal ion ABC transporter, permease protein {ECO:0000313|EMBL:ACD24335.1}; TaxID=935198 species="Bacteria; Firmicutes
NECEvent2014_8_2_scaffold_106_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17535..17966
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27772.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_2_scaffold_106_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18093..18506)
DNA (414bp) protein (138aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridium botulinum E RepID=B2V1V8_CLOBA
Fur family transcriptional regulator
Fur family transcriptional regulator {ECO:0000313|EMBL:KIL08978.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_2_scaffold_106_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18576..19127)
DNA (552bp) protein (184aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=B1QXE4_CLOBU
Membrane protein {ECO:0000313|EMBL:EEP55396.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL526
hypothetical protein
NECEvent2014_8_2_scaffold_106_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19321..20538
DNA (1218bp) protein (406aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
6-phosphofructokinase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVB7_9CLOT rbh
phosphofructokinase family protein
NECEvent2014_8_2_scaffold_106_25
unknown

Not on your lists

comp(20567..20854)
DNA (288bp) protein (96aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_106_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20882..22171)
DNA (1290bp) protein (430aa)
csd1; cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase Csd {ECO:0000313|EMBL:AGX44968.1}; EC=2.8.1.7 {ECO:0000313|EMBL:AGX44968.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Cysteine desulfurase Csd n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWR5_CLOSA
NECEvent2014_8_2_scaffold_106_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22315..23463
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CC44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR24786.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_2_scaffold_106_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23474..24097
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F844_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01208.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_8_2_scaffold_106_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24134..26740)
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA74_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83686.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_8_2_scaffold_106_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26754..28853)
DNA (2100bp) protein (700aa)
RND superfamily exporter n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F157_CLOSG rbh
Antibiotic ABC transporter permease {ECO:0000313|EMBL:KJU72223.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
MMPL family protein
Displaying items 1-30 of 45 in total

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