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NECEvent2014_8_2_scaffold_261

Alias: 178_002_scaffold_261

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_261_1
unknown

Not on your lists

comp(91..612)
DNA (522bp) protein (174aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_261_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

701..1381
DNA (681bp) protein (227aa)
sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Clostridium colicanis 209318 RepID=N9Y474_9CLOT rbh
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:ENZ02617.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_8_2_scaffold_261_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1381..2262
DNA (882bp) protein (294aa)
sdaAA; L-serine dehydratase, alpha chain (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJR7_9CLOT rbh
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EKY28191.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_8_2_scaffold_261_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2645..3148
DNA (504bp) protein (168aa)
Putative ThiW protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETJ5_9CLOT
Putative ThiW protein {ECO:0000313|EMBL:CDG02550.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
thiW; thiamine-precursor transport protein ThiW
NECEvent2014_8_2_scaffold_261_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3198..4958
DNA (1761bp) protein (587aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AIY84515.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AIY84515.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium colicanis 209318 RepID=N9XSE4_9CLOT rbh
NECEvent2014_8_2_scaffold_261_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5092..5298)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97803.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
small acid-soluble spore protein, alpha/beta type
NECEvent2014_8_2_scaffold_261_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5599..7521
DNA (1923bp) protein (641aa)
Putative Non-specific serine/threonine protein kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP89_9CLOT rbh
Putative Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:CDG02544.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
prkA AAA domain protein
NECEvent2014_8_2_scaffold_261_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7528..8700
DNA (1173bp) protein (391aa)
UPF0229 protein CCH01_018370 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBW1_9CLOT rbh
UPF0229 protein CCH01_018370 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
yhbH; sporulation protein YhbH
NECEvent2014_8_2_scaffold_261_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8703..10085
DNA (1383bp) protein (461aa)
Stage V sporulation protein R n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUE1_9CLOT rbh
Stage V sporulation protein R {ECO:0000313|EMBL:EOR20300.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
stage V sporulation protein R
NECEvent2014_8_2_scaffold_261_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10137..10673
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Clostridium butyricum RepID=M8JHP3_CLOBU
rubrerythrin family protein
Rubrerythrin {ECO:0000313|EMBL:KJZ85552.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_8_2_scaffold_261_11
Ixodes ricinus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

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10691..11137
DNA (447bp) protein (149aa)
Putative retrotransposon-like 1 n=1 Tax=Ixodes ricinus RepID=V5HRR7_IXORI
Putative retrotransposon-like 1 {ECO:0000313|EMBL:JAB76748.1}; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodid
hypothetical protein
NECEvent2014_8_2_scaffold_261_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11252..11581
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LQX8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32758.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
NECEvent2014_8_2_scaffold_261_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11641..12162)
DNA (522bp) protein (174aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AGF58887.1}; EC=2.7.8.8 {ECO:0000313|EMBL:AGF58887.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N653_9CLOT
NECEvent2014_8_2_scaffold_261_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12367..13245
DNA (879bp) protein (293aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY0_CLOB8
putative lipid kinase
Diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:ABR32760.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijeri
NECEvent2014_8_2_scaffold_261_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13298..13942
DNA (645bp) protein (215aa)
Putative membrane protein n=2 Tax=Clostridium botulinum B RepID=B2TPZ3_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD25014.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Ekl
NECEvent2014_8_2_scaffold_261_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14046..15980)
DNA (1935bp) protein (645aa)
UPF0313 protein Cbei_0575 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY2_CLOB8
hypothetical protein
UPF0313 protein Cbei_0575 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (str
NECEvent2014_8_2_scaffold_261_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16324..17586
DNA (1263bp) protein (421aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI0002E72F1A
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:AIY80185.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
NECEvent2014_8_2_scaffold_261_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18084..18992
DNA (909bp) protein (303aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Putative Cysteine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP81_9CLOT rbh
cysteine synthase
NECEvent2014_8_2_scaffold_261_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19019..19603
DNA (585bp) protein (195aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Serine acetyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TPY8_CLOBB
NECEvent2014_8_2_scaffold_261_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19607..20596
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMX1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDG02532.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
iron-sulfur cluster-binding protein
NECEvent2014_8_2_scaffold_261_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20778..20954)
DNA (177bp) protein (59aa)
Uncharacterized protein (Fragment) n=1 Tax=Coprobacillus sp. D7 RepID=C3RNR6_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EEQ59131.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
PadR family transcriptional regulator
NECEvent2014_8_2_scaffold_261_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21166..22182
DNA (1017bp) protein (339aa)
Oxidoreductase n=1 Tax=Clostridium intestinale URNW RepID=U2NKS4_9CLOT rbh
Oxidoreductase {ECO:0000313|EMBL:ERK29471.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NAD(P)-dependent oxidoreductase
NECEvent2014_8_2_scaffold_261_23
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22208..22912
DNA (705bp) protein (235aa)
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSC5_9CLOT rbh
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:ENZ02593.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium co
acyltransferase family protein
NECEvent2014_8_2_scaffold_261_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22913..23572
DNA (660bp) protein (220aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF47_9CLOT rbh
NECEvent2014_8_2_scaffold_261_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23725..25014
DNA (1290bp) protein (430aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
PTS system, lactose/cellobiose IIC component family protein n=2 Tax=Clostridium bifermentans RepID=T4VEA6_CLOBI rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan
NECEvent2014_8_2_scaffold_261_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25045..25803
DNA (759bp) protein (253aa)
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVP3_CLOSO rbh
SIS domain protein
SIS domain protein {ECO:0000313|EMBL:AIY84599.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NECEvent2014_8_2_scaffold_261_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25803..26219
DNA (417bp) protein (139aa)
Aminotransferase class I and II family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CUX1_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KJU72841.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aminotransferase class I and II family protein
Displaying 27 items

View Taxonomy