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NECEvent2014_8_2_scaffold_563

Alias: 178_002_scaffold_563

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_563_1
unknown

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2..127
DNA (126bp) protein (42aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_563_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(166..1368)
DNA (1203bp) protein (401aa)
PolyA polymerase n=1 Tax=Clostridium sp. CAG:221 RepID=R6GPI8_9CLOT
poly A polymerase head domain protein
Poly A polymerase head domain protein {ECO:0000313|EMBL:AIY82523.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_8_2_scaffold_563_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1450..2619)
DNA (1170bp) protein (390aa)
yciB; putative L,D-transpeptidase YciB (EC:2.-.-.-)
Putative L,D-transpeptidase YciB {ECO:0000313|EMBL:AGX41099.1}; EC=2.-.-.- {ECO:0000313|EMBL:AGX41099.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
Putative L,D-transpeptidase YciB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJW5_CLOSA
NECEvent2014_8_2_scaffold_563_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2767..3570
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THD0_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23390.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_8_2_scaffold_563_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3637..4842
DNA (1206bp) protein (402aa)
Exonuclease SbcCD, D subunit n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CNF3_CLOSO rbh
DNA repair exonuclease {ECO:0000313|EMBL:KJU71848.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sbcD; exonuclease SbcCD, D subunit
NECEvent2014_8_2_scaffold_563_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4864..7965
DNA (3102bp) protein (1034aa)
Exonuclease SbcC {ECO:0000313|EMBL:CEN90147.1}; EC=3.1.11.- {ECO:0000313|EMBL:CEN90147.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
AAA domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPH5_CLOBI rbh
AAA domain protein
NECEvent2014_8_2_scaffold_563_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8125..8964
DNA (840bp) protein (280aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
resE1; sensor histidine kinase ResE (EC:2.7.13.3)
Histidine kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TL63_9CLOT
NECEvent2014_8_2_scaffold_563_trna_1
unknown

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9036..9107
DNA (72bp)
transferRNA
NECEvent2014_8_2_scaffold_563_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9273..10415
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPP8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDG02724.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_8_2_scaffold_563_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10412..11308)
DNA (897bp) protein (299aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=457396
psd; phosphatidylserine decarboxylase proenzyme Psd (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q377_9CLOT rbh
NECEvent2014_8_2_scaffold_563_10
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11640..13388
DNA (1749bp) protein (583aa)
iron hydrogenase 1 (EC:1.12.7.2)
Hydrogenase n=1 Tax=Clostridium paraputrificum RepID=Q6F4C7_9CLOT rbh
Hydrogenase {ECO:0000313|EMBL:BAD29951.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
NECEvent2014_8_2_scaffold_563_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13448..13651
DNA (204bp) protein (68aa)
Heavy metal-associated domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKB1_9CLOT
heavy-metal-associated domain protein
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AIY83644.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
Displaying 12 items

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