ggKbase home page

NECEvent2014_8_2_scaffold_124

Alias: 178_002_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_124_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

315..1055
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QYR8_CLOBU rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_2_scaffold_124_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1068..1766
DNA (699bp) protein (233aa)
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Clostridium butyricum RepID=B1QYR7_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ35950.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
two component transcriptional regulator
NECEvent2014_8_2_scaffold_124_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1771..3459
DNA (1689bp) protein (563aa)
resE3; sensor histidine kinase ResE (EC:2.7.13.3)
Sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=M8KCU7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83039.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_2_scaffold_124_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3965..4897
DNA (933bp) protein (311aa)
UPI00039D3904 related cluster n=1 Tax=unknown RepID=UPI00039D3904 rbh
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16801.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
pstS; phosphate-binding protein PstS 1
NECEvent2014_8_2_scaffold_124_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5014..5904
DNA (891bp) protein (297aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Clostridium butyricum RepID=M8JJC2_CLOBU rbh
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:KJZ84574.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
phosphate ABC transporter, inner membrane subunit PstC
NECEvent2014_8_2_scaffold_124_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5904..6788
DNA (885bp) protein (295aa)
Phosphate ABC transporter, permease protein PstA n=4 Tax=Clostridium butyricum RepID=B1QYR3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84573.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
yqgI; ABC transporter permease protein YqgI
NECEvent2014_8_2_scaffold_124_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6798..7547
DNA (750bp) protein (250aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
pstB1; phosphate import ATP-binding protein PstB (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K4L2_CLOBU rbh
NECEvent2014_8_2_scaffold_124_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7569..8231
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Clostridium butyricum RepID=B1QYR1_CLOBU rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
phosphate uptake regulator PhoU
NECEvent2014_8_2_scaffold_124_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8413..8598
DNA (186bp) protein (62aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1523154 species="Bacteria; Firmic
Polyphosphate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJB7_CLOBU
NECEvent2014_8_2_scaffold_124_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8830..10170
DNA (1341bp) protein (447aa)
Fe-S oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8JHZ1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82979.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NifB/MoaA family Fe-S oxidoreductase
NECEvent2014_8_2_scaffold_124_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10170..11486
DNA (1317bp) protein (439aa)
GTPase Der n=4 Tax=Clostridium butyricum RepID=B1QYI8_CLOBU rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostri
der; GTPase Der
NECEvent2014_8_2_scaffold_124_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11491..12483
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Clostridium butyricum RepID=B1QYI7_CLOBU rbh
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
NECEvent2014_8_2_scaffold_124_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12702..13373
DNA (672bp) protein (224aa)
UPI0003D5C355 related cluster n=1 Tax=unknown RepID=UPI0003D5C355 rbh
Zinc import ATP-binding protein ZnuC {ECO:0000313|EMBL:ETI89170.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
metal transport system ATP-binding protein
NECEvent2014_8_2_scaffold_124_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13395..14195
DNA (801bp) protein (267aa)
D-alanine--poly(Phosphoribitol) ligase subunit 2 {ECO:0000313|EMBL:KJZ97655.1}; EC=6.1.1.13 {ECO:0000313|EMBL:KJZ97655.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
High-affinity Zinc uptake system membrane protein ZnuB n=2 Tax=Clostridium butyricum RepID=B1QXE2_CLOBU rbh
ABC-type Mn2+/Zn2+ transport system, permease component
NECEvent2014_8_2_scaffold_124_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14245..14667)
DNA (423bp) protein (141aa)
UPI0003D66156 related cluster n=1 Tax=unknown RepID=UPI0003D66156
Transcriptional regulator, Fur family {ECO:0000313|EMBL:ETI89172.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
Fe2+/Zn2+ uptake regulation protein
NECEvent2014_8_2_scaffold_124_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14728..15279)
DNA (552bp) protein (184aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=M8J751_CLOBU rbh
Integral membrane protein {ECO:0000313|EMBL:KJZ87543.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
membrane protein
NECEvent2014_8_2_scaffold_124_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15661..16875
DNA (1215bp) protein (405aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp (EC:2.7.1.90)
Phosphofructokinase domain protein n=3 Tax=Clostridium butyricum RepID=B1QXE5_CLOBU rbh
NECEvent2014_8_2_scaffold_124_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16948..18258)
DNA (1311bp) protein (437aa)
csd1; cysteine desulfurase Csd (EC:2.8.1.7)
Aminotransferase n=4 Tax=Clostridium butyricum RepID=B1QXE6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30988.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_124_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18400..18867
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JG35_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI89176.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_2_scaffold_124_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18876..19511
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHG7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI89177.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_2_scaffold_124_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19592..20182)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium butyricum DKU-01 RepID=M8J756_CLOBU rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KHD15886.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
transcriptional regulator
NECEvent2014_8_2_scaffold_124_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20586..22511
DNA (1926bp) protein (642aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QXF0_CLOBU rbh
ATPase components of ABC transporter {ECO:0000313|EMBL:KJZ87532.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN1
ydiF4; ABC transporter ATP-binding protein YdiF
NECEvent2014_8_2_scaffold_124_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22637..23074)
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Clostridium butyricum RepID=M8K2S0_CLOBU
NECEvent2014_8_2_scaffold_124_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23282..23827)
DNA (546bp) protein (182aa)
Cna protein B-type domain n=4 Tax=Clostridium butyricum RepID=B1QXF2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87511.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cna B domain protein
NECEvent2014_8_2_scaffold_124_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23929..29205)
DNA (5277bp) protein (1759aa)
Diguanylate cyclase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97596.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
diguanylate cyclase
NECEvent2014_8_2_scaffold_124_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29389..30651)
DNA (1263bp) protein (421aa)
Uracil-xanthine permease n=2 Tax=Clostridium butyricum RepID=R0A3B3_CLOBU rbh
Uracil-xanthine permease {ECO:0000313|EMBL:ENZ30998.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uracil permease
NECEvent2014_8_2_scaffold_124_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30930..31658
DNA (729bp) protein (243aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ87533.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ87533.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Polysaccharide deacetylase n=2 Tax=Clostridium butyricum RepID=M8KAY5_CLOBU rbh
polysaccharide deacetylase
NECEvent2014_8_2_scaffold_124_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31734..32279)
DNA (546bp) protein (182aa)
Tryptophan transport protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2S4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97594.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_2_scaffold_124_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32780..34111)
DNA (1332bp) protein (444aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JG43_CLOBU rbh
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(S) {ECO:0000313|EMBL:KJZ87460.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
diguanylate cyclase (GGDEF) domain-containing protein
NECEvent2014_8_2_scaffold_124_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34139..34234)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31002.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying items 1-30 of 37 in total

View Taxonomy