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NECEvent2014_8_2_scaffold_204

Alias: 178_002_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_204_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..146
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACU7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34178.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_204_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


893..2182
DNA (1290bp) protein (430aa)
aspS2; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=3 Tax=Clostridium butyricum RepID=B1QS37_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96006.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_2_scaffold_204_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2486..2764
DNA (279bp) protein (93aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=4 Tax=Clostridium butyricum RepID=B1QS36_CLOBU
hypothetical protein
NECEvent2014_8_2_scaffold_204_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2780..4219
DNA (1440bp) protein (480aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=997898
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Clostridium butyricum RepID=M8KEX8_CLOBU rbh
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
NECEvent2014_8_2_scaffold_204_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4232..5671
DNA (1440bp) protein (480aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN37_CLOBU rbh
NECEvent2014_8_2_scaffold_204_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5728..6093)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95191.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_2_scaffold_204_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6236..6529)
DNA (294bp) protein (98aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:KJZ86355.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJZ86355.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
Acetolactate synthase isozyme III small subunit n=4 Tax=Clostridium butyricum RepID=B1QS32_CLOBU
amino acid-binding ACT domain protein
NECEvent2014_8_2_scaffold_204_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6522..8255)
DNA (1734bp) protein (578aa)
ilvB2; acetolactate synthase isozyme 1 large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2R3_CLOBU rbh
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ENZ34171.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_8_2_scaffold_204_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8934..9950
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z3G0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34170.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_204_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10022..10609
DNA (588bp) protein (196aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6M8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34169.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
isopentenyldiphosphate isomerase
NECEvent2014_8_2_scaffold_204_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10786..12129
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACT6_CLOBU rbh
MATE efflux family protein {ECO:0000313|EMBL:ENZ34168.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mate efflux family protein
NECEvent2014_8_2_scaffold_204_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12306..13370
DNA (1065bp) protein (355aa)
UPI0003D5AD18 related cluster n=1 Tax=unknown RepID=UPI0003D5AD18 rbh
Pectate lyase L {ECO:0000313|EMBL:ETI88599.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_2_scaffold_204_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13628..14107
DNA (480bp) protein (160aa)
Putative membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JAZ4_CLOBU rbh
Putative membrane protein {ECO:0000313|EMBL:KJZ86422.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative membrane protein
NECEvent2014_8_2_scaffold_204_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14200..15132)
DNA (933bp) protein (311aa)
UAA transporter family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEY5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86344.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ybfH1; transporter YbhF
NECEvent2014_8_2_scaffold_204_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15348..16160
DNA (813bp) protein (271aa)
HAD superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86364.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cof-like hydrolase
NECEvent2014_8_2_scaffold_204_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16191..16520
DNA (330bp) protein (110aa)
Thioredoxin n=3 Tax=Clostridium butyricum RepID=B1R0G8_CLOBU
Thioredoxin domain protein {ECO:0000313|EMBL:EEP54419.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. Bo
thioredoxin domain protein
NECEvent2014_8_2_scaffold_204_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16607..17833)
DNA (1227bp) protein (409aa)
yfmL; putative ATP-dependent RNA helicase YfmL (EC:3.6.4.13)
Dead/deah box helicase domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLC4_CLOBU rbh
ATP-dependent RNA helicase YfmL {ECO:0000313|EMBL:KJZ86342.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;
NECEvent2014_8_2_scaffold_204_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18116..18784
DNA (669bp) protein (223aa)
Putative membrane protein n=3 Tax=Clostridium butyricum RepID=B1R0H0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86361.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_204_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18915..19562)
DNA (648bp) protein (216aa)
thiE2; thiamine-phosphate pyrophosphorylase ThiE (EC:2.5.1.3)
Regulatory protein teni n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEY9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86356.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_2_scaffold_204_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19549..20706)
DNA (1158bp) protein (386aa)
thiH2; 2-iminoacetate synthase ThiH (EC:4.1.99.19)
Thiazole biosynthesis protein ThiH n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN18_CLOBU rbh
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:ENZ34159.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60
NECEvent2014_8_2_scaffold_204_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20725..21501)
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
thiG; thiazole synthase ThiG (EC:2.8.1.10)
Thiazole synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK34_CLOBU rbh
NECEvent2014_8_2_scaffold_204_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21558..22376)
DNA (819bp) protein (273aa)
Thiamine biosynthesis protein ThiF n=2 Tax=Clostridium butyricum RepID=B1R0H5_CLOBU rbh
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EEP52923.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
thiF; thiamine biosynthesis protein ThiF
NECEvent2014_8_2_scaffold_204_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22369..22566)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=3 Tax=Clostridium butyricum RepID=B1R0H6_CLOBU
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EEP53382.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
thiS; thiamine biosynthesis protein ThiS
NECEvent2014_8_2_scaffold_204_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22960..23220
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEZ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86445.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_204_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23324..24832
DNA (1509bp) protein (503aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
dbpA; ATP-dependent RNA helicase DbpA (EC:3.6.4.13)
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN12_CLOBU rbh
NECEvent2014_8_2_scaffold_204_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25016..25885
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map2; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK35_CLOBU rbh
NECEvent2014_8_2_scaffold_204_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26241..26963
DNA (723bp) protein (241aa)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLD3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95205.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transporter
NECEvent2014_8_2_scaffold_204_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27005..27844
DNA (840bp) protein (280aa)
Glutamine-binding protein (GlnBP) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB05_CLOBU rbh
Glutamine-binding protein (GlnBP) {ECO:0000313|EMBL:EEP54196.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
peb1A: major cell-binding factor
NECEvent2014_8_2_scaffold_204_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27844..28572
DNA (729bp) protein (243aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEZ4_CLOBU rbh
Glutamate transport permease protein {ECO:0000313|EMBL:KJZ86481.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN1
glnM; putative glutamine ABC transporter permease protein GlnM
NECEvent2014_8_2_scaffold_204_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28574..29206
DNA (633bp) protein (211aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN06_CLOBU rbh
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:ENZ34149.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
glnP2; putative glutamine ABC transporter permease protein GlnP
Displaying items 1-30 of 31 in total

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