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NECEvent2014_8_2_scaffold_249

Alias: 178_002_scaffold_249

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_249_1
unknown

Not on your lists

3..224
DNA (222bp) protein (74aa)
Uncharacterized protein; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_8_2_scaffold_249_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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217..1155
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31179.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_249_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1265..1447
DNA (183bp) protein (61aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1R176_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94937.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ssp; small, acid-soluble spore protein 1
NECEvent2014_8_2_scaffold_249_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1568..2065)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGD5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31177.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PAP2 superfamily protein
NECEvent2014_8_2_scaffold_249_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2291..4312
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUC5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31176.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_249_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4415..5314
DNA (900bp) protein (300aa)
ABC transporter, substrate-binding protein n=4 Tax=Clostridium butyricum RepID=B1R179_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84428.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
periplasmic solute binding protein
NECEvent2014_8_2_scaffold_249_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5375..6358)
DNA (984bp) protein (328aa)
PAS domain S-box protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI0_CLOBU rbh
PAS domain S-box protein {ECO:0000313|EMBL:ENZ31174.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
diguanylate cyclase/phosphodiesterase
NECEvent2014_8_2_scaffold_249_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6569..7225
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0A3Z0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31173.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_249_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7382..9202
DNA (1821bp) protein (607aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGF2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31172.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mutS1; DNA mismatch repair protein MutS
NECEvent2014_8_2_scaffold_249_10

Not on your lists

9215..10153
DNA (939bp) protein (313aa)
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K351_CLOBU rbh
Exonuclease family protein {ECO:0000313|EMBL:ETJ16709.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
exonuclease
NECEvent2014_8_2_scaffold_249_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10275..10724
DNA (450bp) protein (150aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:KJZ91454.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KJZ91454.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
CBS domain protein n=4 Tax=Clostridium butyricum RepID=B1R184_CLOBU rbh
CBS-domain-containing membrane protein
NECEvent2014_8_2_scaffold_249_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10933..12084
DNA (1152bp) protein (384aa)
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2)
Ribosomal protein S1 n=2 Tax=Clostridium butyricum RepID=C4IE80_CLOBU rbh
SSU ribosomal protein S1p {ECO:0000313|EMBL:KJZ91444.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_8_2_scaffold_249_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12159..13577)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000313|EMBL:KHD14498.1}; EC=2.7.1.40 {ECO:0000313|EMBL:KHD14498.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
pykF; pyruvate kinase PykF (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3Y4_CLOBU rbh
NECEvent2014_8_2_scaffold_249_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13759..15216
DNA (1458bp) protein (486aa)
pepD; cytosol non-specific dipeptidase PepD (EC:3.4.13.18)
Xaa-His dipeptidase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC1_CLOBU rbh
Xaa-His dipeptidase {ECO:0000313|EMBL:ENZ31167.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_249_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15604..16188
DNA (585bp) protein (195aa)
SagA protein n=3 Tax=Clostridium butyricum RepID=B1R188_CLOBU rbh
NLP/P60 protein {ECO:0000313|EMBL:EEP55272.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262
NLP/P60 protein
NECEvent2014_8_2_scaffold_249_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16561..17085
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBB8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84456.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_249_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17329..17895
DNA (567bp) protein (189aa)
Maf-like protein maf n=3 Tax=Clostridium butyricum RepID=B1R190_CLOBU rbh
Maf-like protein ClosIBUN125C_CONTIG61g03346 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
Maf-like protein
NECEvent2014_8_2_scaffold_249_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17941..18630
DNA (690bp) protein (230aa)
DNA repair protein RadC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHW1_CLOBU rbh
DNA repair protein RadC {ECO:0000313|EMBL:KJZ84473.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
radC; DNA replication and repair protein RadC
NECEvent2014_8_2_scaffold_249_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18654..19673
DNA (1020bp) protein (340aa)
Rod shape-determining protein MreB n=4 Tax=Clostridium butyricum RepID=B1R192_CLOBU rbh
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:ENZ31162.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
mreB; Rod shape-determining protein MreB rbh
NECEvent2014_8_2_scaffold_249_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19681..20529
DNA (849bp) protein (283aa)
Cell shape-determining protein MreC n=4 Tax=Clostridium butyricum RepID=B1R193_CLOBU rbh
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
rod shape-determining protein MreC
NECEvent2014_8_2_scaffold_249_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20542..21036
DNA (495bp) protein (165aa)
Rod shape-determining protein MreD n=2 Tax=Clostridium butyricum RepID=M8KBB1_CLOBU rbh
Sugar/maltose fermentation stimulation protein {ECO:0000313|EMBL:KJZ96906.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
mreD; rod shape-determining protein, subunit D
NECEvent2014_8_2_scaffold_249_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21030..24026
DNA (2997bp) protein (999aa)
Penicillin-binding Protein dimerisation domain family n=2 Tax=Clostridium butyricum RepID=B1R195_CLOBU rbh
Penicillin-binding protein, transpeptidase {ECO:0000313|EMBL:EEP55323.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
penicillin-binding Protein dimerisation domain family
NECEvent2014_8_2_scaffold_249_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24414..25097
DNA (684bp) protein (228aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHV3_CLOBU rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
sugar fermentation stimulation protein A
NECEvent2014_8_2_scaffold_249_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25307..25966
DNA (660bp) protein (220aa)
Probable septum site-determining protein MinC n=4 Tax=Clostridium butyricum RepID=B1R197_CLOBU rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
minC; septum formation inhibitor
NECEvent2014_8_2_scaffold_249_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25988..26788
DNA (801bp) protein (267aa)
Site-determining protein n=4 Tax=Clostridium butyricum RepID=B1R198_CLOBU rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
minD; septum site-determining protein MinD
NECEvent2014_8_2_scaffold_249_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26803..27069
DNA (267bp) protein (89aa)
Cell division topological specificity factor n=4 Tax=Clostridium butyricum RepID=B1R199_CLOBU
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
cell division topological specificity factor MinE
Displaying 26 items

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