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NECEvent2014_8_2_scaffold_259

Alias: 178_002_scaffold_259

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_259_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

279..893
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83616.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(985..1131)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KFG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34343.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_259_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1363..1560
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QTJ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83623.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_2_scaffold_259_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1782..3002
DNA (1221bp) protein (407aa)
Threonine ammonia-lyase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3U7_CLOBU rbh
Threonine ammonia-lyase {ECO:0000313|EMBL:ENZ34345.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
threonine dehydratase
NECEvent2014_8_2_scaffold_259_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3070..3249)
DNA (180bp) protein (60aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTI8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83699.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3321..3977)
DNA (657bp) protein (219aa)
Phosphorylated carbohydrates phosphatase {ECO:0000313|EMBL:EEP53759.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEP53759.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
Phosphorylated carbohydrates phosphatase n=2 Tax=Clostridium butyricum RepID=B1QTI7_CLOBU rbh
NECEvent2014_8_2_scaffold_259_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4150..5319)
DNA (1170bp) protein (390aa)
Permease n=3 Tax=Clostridium butyricum RepID=B1QTI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34348.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5623..6240)
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
udk; uridine kinase Udk (EC:2.7.1.48)
Uridine kinase n=4 Tax=Clostridium butyricum RepID=B1QTI5_CLOBU rbh
NECEvent2014_8_2_scaffold_259_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6568..7362)
DNA (795bp) protein (265aa)
UPI0003D67934 related cluster n=1 Tax=unknown RepID=UPI0003D67934 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI90055.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7721..8569)
DNA (849bp) protein (283aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z368_CLOBU rbh
DegV family protein {ECO:0000313|EMBL:KJZ83658.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DegV family protein
NECEvent2014_8_2_scaffold_259_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8714..8866
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTI2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83613.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9000..9155)
DNA (156bp) protein (52aa)
Zinc-binding domain protein n=2 Tax=Clostridium RepID=U5MSK6_CLOSA
zinc-binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ34353.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_259_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9448..11166)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLX0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83628.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11610..11963)
DNA (354bp) protein (118aa)
Zinc finger protein n=4 Tax=Clostridium butyricum RepID=B1QTH9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34355.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_259_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12061..13311)
DNA (1251bp) protein (417aa)
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:KJZ83646.1}; EC=1.5.3.1 {ECO:0000313|EMBL:KJZ83646.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8K756_CLOBU rbh
thioredoxin reductase rbh
NECEvent2014_8_2_scaffold_259_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13549..14979)
DNA (1431bp) protein (477aa)
Glycerol-3-phosphate dehydrogenase, glpa n=4 Tax=Clostridium butyricum RepID=B1QTH7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34357.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
FAD dependent oxidoreductase
NECEvent2014_8_2_scaffold_259_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15162..16661)
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP
glpK1; glycerol kinase GlpK (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD78_CLOBU rbh
NECEvent2014_8_2_scaffold_259_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16736..17440)
DNA (705bp) protein (235aa)
Glycerol uptake facilitator protein n=2 Tax=Clostridium butyricum RepID=C4IKF0_CLOBU rbh
Glycerol uptake facilitator protein {ECO:0000313|EMBL:EEP54882.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E
glpF; putative glycerol uptake facilitator protein GlpF
NECEvent2014_8_2_scaffold_259_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17582..18244)
DNA (663bp) protein (221aa)
UPI0003D69BE6 related cluster n=1 Tax=unknown RepID=UPI0003D69BE6 rbh
Glycerol-3-phosphate responsive antiterminator {ECO:0000313|EMBL:ETI90252.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
glycerol-3-phosphate responsive antiterminator
NECEvent2014_8_2_scaffold_259_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18386..19948)
DNA (1563bp) protein (521aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ydiF3; acetate CoA-transferase YdiF (EC:2.8.3.8)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z377_CLOBU rbh
NECEvent2014_8_2_scaffold_259_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19988..20605)
DNA (618bp) protein (206aa)
Sugar phosphate aldolase n=4 Tax=Clostridium butyricum RepID=B1R2W3_CLOBU rbh
Ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:KJZ83705.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
L-ribulose-5-phosphate 4-epimerase
NECEvent2014_8_2_scaffold_259_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20932..21813)
DNA (882bp) protein (294aa)
UPI0003D6966E related cluster n=1 Tax=unknown RepID=UPI0003D6966E rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ETI90255.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
glycerophosphoryl diester phosphodiesterase
NECEvent2014_8_2_scaffold_259_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21837..23639)
DNA (1803bp) protein (601aa)
UPI0003D5AE9B related cluster n=2 Tax=unknown RepID=UPI0003D5AE9B rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETI90256.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis sensory transducer
NECEvent2014_8_2_scaffold_259_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23926..24738)
DNA (813bp) protein (271aa)
ykrA1; putative phosphatase YkrA (EC:3.1.3.-)
Cof-like hydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3W0_CLOBU rbh
Hydrolase (HAD superfamily) in cluster with DUF1447 {ECO:0000313|EMBL:KJZ83664.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_8_2_scaffold_259_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24830..26131)
DNA (1302bp) protein (434aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:KJZ96762.1}; EC=1.1.1.3 {ECO:0000313|EMBL:KJZ96762.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1R2V9_CLOBU rbh
Displaying 25 items

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