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NECEvent2014_8_2_scaffold_300

Alias: 178_002_scaffold_300

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_300_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..405)
DNA (405bp) protein (135aa)
Glutamate synthase (NADPH), homotetrameric n=3 Tax=Clostridium butyricum DKU-01 RepID=M8J7L7_CLOBU
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ35702.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
oxidoreductase
NECEvent2014_8_2_scaffold_300_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(408..1298)
DNA (891bp) protein (297aa)
Glutamate synthase NADPH large chain {ECO:0000313|EMBL:KJZ87248.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KJZ87248.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Oxidoreductase FAD/NAD n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBH1_CLOBU rbh
ferredoxin-NADP(+) reductase subunit alpha
NECEvent2014_8_2_scaffold_300_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1450..2526)
DNA (1077bp) protein (359aa)
2,3-butanediol dehydrogenase, R-alcohol forming, (R)-and (S)-acetoin-specific {ECO:0000313|EMBL:KJZ83224.1}; EC=1.1.1.4 {ECO:0000313|EMBL:KJZ83224.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clo
Sorbitol dehydrogenase n=3 Tax=Clostridium butyricum RepID=B1QWU3_CLOBU rbh
alcohol dehydrogenase
NECEvent2014_8_2_scaffold_300_4
unknown

Not on your lists

comp(2680..2772)
DNA (93bp) protein (31aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_300_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2769..4757)
DNA (1989bp) protein (663aa)
UPI0003D65D1C related cluster n=1 Tax=unknown RepID=UPI0003D65D1C rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83215.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Fis family GAF modulated sigma54 specific transcriptional regulator
NECEvent2014_8_2_scaffold_300_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5253..7007)
DNA (1755bp) protein (585aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Clostridium butyricum RepID=B1QWU5_CLOBU rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP54936.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis sensory transducer
NECEvent2014_8_2_scaffold_300_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8264..9040)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JC65_CLOBU rbh
Mobile element protein {ECO:0000313|EMBL:KJZ82852.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
transposase
NECEvent2014_8_2_scaffold_300_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9430..9615)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KG44_CLOBU
transposase
Mobile element protein {ECO:0000313|EMBL:KJZ85397.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_2_scaffold_300_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9717..10067)
DNA (351bp) protein (117aa)
IS66 Orf2 like protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7X3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30341.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_300_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10060..10371)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLB3_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ89453.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_8_2_scaffold_300_11
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10623..12404)
DNA (1782bp) protein (594aa)
Divergent AAA domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QTK8_9CYAN rbh
Divergent AAA domain protein {ECO:0000313|EMBL:ERT09766.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
NECEvent2014_8_2_scaffold_300_12
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12548..13663)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X3M0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KEI12535.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691
hypothetical protein
NECEvent2014_8_2_scaffold_300_13
unknown

Not on your lists

comp(13879..14010)
DNA (132bp) protein (44aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_300_14
unknown

Not on your lists

comp(14061..14261)
DNA (201bp) protein (67aa)

This feature has no annotations

NECEvent2014_8_2_scaffold_300_15
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14621..15775)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY6_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08683.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
NECEvent2014_8_2_scaffold_300_16
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15779..17404)
DNA (1626bp) protein (542aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EIA08684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EIA08684.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavo
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY7_9FLAO
N-6 DNA methylase
NECEvent2014_8_2_scaffold_300_17
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17440..17895)
DNA (456bp) protein (152aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EIA08684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EIA08684.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavo
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY7_9FLAO
NECEvent2014_8_2_scaffold_300_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18609..20039)
DNA (1431bp) protein (477aa)
Putative PAS/PAC sensor protein n=2 Tax=Clostridium butyricum RepID=B1QWW0_CLOBU rbh
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EEP53871.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 st
PAS/PAC sensor protein
NECEvent2014_8_2_scaffold_300_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20129..20413)
DNA (285bp) protein (95aa)
Anti-sigma factor antagonist n=2 Tax=Clostridium butyricum RepID=M8KBH7_CLOBU
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
anti-sigma-factor antagonist
NECEvent2014_8_2_scaffold_300_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20425..22425)
DNA (2001bp) protein (667aa)
Methyl-accepting chemotaxis protein signaling domain n=3 Tax=Clostridium butyricum RepID=B1QWW2_CLOBU rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP53344.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis sensory transducer
NECEvent2014_8_2_scaffold_300_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22503..22925)
DNA (423bp) protein (141aa)
UPI0003D59351 related cluster n=1 Tax=unknown RepID=UPI0003D59351
Anti-sigma F factor {ECO:0000313|EMBL:ETI91009.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ATP-binding region ATPase domain protein
NECEvent2014_8_2_scaffold_300_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23113..23352)
DNA (240bp) protein (80aa)
Glutamate synthase , homotetrameric n=4 Tax=Clostridium butyricum RepID=B1QWW4_CLOBU
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ35694.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
oxidoreductase
Displaying 22 items

View Taxonomy