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NECEvent2014_8_2_scaffold_310

Alias: 178_002_scaffold_310

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_310_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..99
DNA (99bp) protein (33aa)
Rubrerythrin n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Z9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86159.1}; Flags: Fragment;; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
rubrerythrin
NECEvent2014_8_2_scaffold_310_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(318..992)
DNA (675bp) protein (225aa)
Putative RNAase regulator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMP8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85356.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
macro domain-containing protein
NECEvent2014_8_2_scaffold_310_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1244..2704
DNA (1461bp) protein (487aa)
Two-component sensor kinase yycG {ECO:0000313|EMBL:KJZ85320.1}; EC=2.7.3.- {ECO:0000313|EMBL:KJZ85320.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JC95_CLOBU rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_8_2_scaffold_310_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2733..3431
DNA (699bp) protein (233aa)
Transcriptional regulatory protein ResD n=2 Tax=Clostridium butyricum RepID=B1QS93_CLOBU rbh
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:ETI88968.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyri
srrA2; transcriptional regulatory protein SrrA
NECEvent2014_8_2_scaffold_310_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3598..4848
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0Z1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33365.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_310_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4850..6343
DNA (1494bp) protein (498aa)
Secretion protein HlyD family protein n=2 Tax=Clostridium butyricum RepID=M8JLE7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33364.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secretion protein HlyD family protein
NECEvent2014_8_2_scaffold_310_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6348..7085
DNA (738bp) protein (246aa)
Macrolide export ATP-binding/permease protein MacB n=2 Tax=Clostridium butyricum RepID=M8JMQ2_CLOBU rbh
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:ETI88965.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
ABC-type antimicrobial peptide transport system, ATPase component
NECEvent2014_8_2_scaffold_310_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7076..8542
DNA (1467bp) protein (489aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JC98_CLOBU rbh
ABC transporter, permease protein {ECO:0000313|EMBL:KJZ85332.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
yknZ; ABC transporter permease YknZ
NECEvent2014_8_2_scaffold_310_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8655..9326)
DNA (672bp) protein (224aa)
Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium butyricum RepID=M8JBP6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85354.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
NECEvent2014_8_2_scaffold_310_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9591..10814
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0Y8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33360.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein
NECEvent2014_8_2_scaffold_310_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10846..11790
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKP8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33359.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
maltose/maltodextrin ABC transporter permease
NECEvent2014_8_2_scaffold_310_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11783..12691
DNA (909bp) protein (303aa)
Maltose ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=B1QS86_CLOBU rbh
Maltose ABC transporter, permease protein {ECO:0000313|EMBL:EEP54152.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
carbohydrate ABC transporter membrane protein 2, CUT1 family
NECEvent2014_8_2_scaffold_310_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12736..14460
DNA (1725bp) protein (575aa)
Cyclomaltodextrinase (EC:3.2.1.54)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMM6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33357.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_310_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14663..15454
DNA (792bp) protein (264aa)
Phosphoglycolate phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBQ2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96591.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nagD2; protein NagD
NECEvent2014_8_2_scaffold_310_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15813..16037
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS83_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_310_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16153..19560)
DNA (3408bp) protein (1136aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNF9_CLOPF rbh
endo-beta-N-acetylglucosaminidase
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDT23685.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
NECEvent2014_8_2_scaffold_310_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19931..20236
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS87_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18409.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_2_scaffold_310_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20285..20686
DNA (402bp) protein (134aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=7 Tax=Clostridium perfringens RepID=H7CS88_CLOPF
NECEvent2014_8_2_scaffold_310_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20673..22172
DNA (1500bp) protein (500aa)
Carbohydrate kinase family protein n=2 Tax=Clostridium perfringens RepID=B1R7X9_CLOPF rbh
Carbohydrate kinase family protein {ECO:0000313|EMBL:EDT23704.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
carbohydrate kinase
NECEvent2014_8_2_scaffold_310_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22233..22826
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CS89_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 20 items

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