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NECEvent2014_8_2_scaffold_311

Alias: 178_002_scaffold_311

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_311_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(55..333)
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CTI6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16461.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_2_scaffold_311_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

648..995
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6F1_CLOPF
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
thioredoxin
NECEvent2014_8_2_scaffold_311_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1304..1636
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CTI8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80446.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_2_scaffold_311_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1662..2873
DNA (1212bp) protein (404aa)
Probable cytochrome C-type biogenesis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XME8_CLOPE rbh
cytochrome C-type biogenesis protein
Probable cytochrome C-type biogenesis protein {ECO:0000313|EMBL:BAB80447.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_8_2_scaffold_311_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3401..5122
DNA (1722bp) protein (574aa)
Alpha/beta hydrolase fold family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT49_CLOP1 rbh
alpha/beta hydrolase
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EDT24165.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_8_2_scaffold_311_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5579..6991
DNA (1413bp) protein (471aa)
Carbon starvation protein CstA n=2 Tax=Clostridium perfringens RepID=B1RI46_CLOPF rbh
cstA; carbon starvation protein CstA
Carbon starvation protein CstA {ECO:0000313|EMBL:EIA17993.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_8_2_scaffold_311_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6972..7097
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZR5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89046.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_311_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7546..8562
DNA (1017bp) protein (339aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JID3_CLOBU rbh
NECEvent2014_8_2_scaffold_311_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8807..9949
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANK6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33677.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
xylanase/chitin deacetylase
NECEvent2014_8_2_scaffold_311_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10188..12422
DNA (2235bp) protein (745aa)
YhgE/Pip domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z196_CLOBU rbh
YhgE/Pip domain-containing protein {ECO:0000313|EMBL:ENZ33676.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60
phage infection protein
NECEvent2014_8_2_scaffold_311_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12471..12995)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1X3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33675.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_311_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13191..13865
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALP4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33674.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_311_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14054..14743
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum 60E.3 RepID=R0ABB7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89017.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two component transcriptional regulator
NECEvent2014_8_2_scaffold_311_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14740..15795
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANJ9_CLOBU rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_8_2_scaffold_311_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15984..16751
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z188_CLOBU rbh
Bacitracin export ATP-binding protein BceA {ECO:0000313|EMBL:ETI91074.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
ABC transporter related protein
NECEvent2014_8_2_scaffold_311_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16753..18810
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1W7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33670.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
NECEvent2014_8_2_scaffold_311_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18995..20311
DNA (1317bp) protein (439aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridium butyricum 60E.3 RepID=R0ALN7_CLOBU rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ33669.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
diguanylate cyclase and metal dependent phosphohydrolase
NECEvent2014_8_2_scaffold_311_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20265..20747
DNA (483bp) protein (161aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridium butyricum 60E.3 RepID=R0ALN7_CLOBU
Sensory box/ggdef domain/hd protein {ECO:0000313|EMBL:ETI91076.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
diguanylate cyclase and metal dependent phosphohydrolase
NECEvent2014_8_2_scaffold_311_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20826..22760
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABA9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33668.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
htpG; chaperone protein HtpG
Displaying 19 items

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