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NECEvent2014_8_2_scaffold_340

Alias: 178_002_scaffold_340

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_340_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61..1227
DNA (1167bp) protein (389aa)
Alkyldihydroxyacetonephosphate synthase {ECO:0000313|EMBL:KJZ84374.1}; EC=2.5.1.26 {ECO:0000313|EMBL:KJZ84374.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
Metallo-beta-lactamase/flavodoxin n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AL18_CLOBU rbh
Uncharacterized flavoproteins
NECEvent2014_8_2_scaffold_340_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1411..2124)
DNA (714bp) protein (238aa)
Trehalose operon repressor n=2 Tax=Clostridium butyricum RepID=R0A8Q9_CLOBU rbh
Trehalose operon transcriptional repressor {ECO:0000313|EMBL:KJZ84342.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
treR; trehalose operon repressor
NECEvent2014_8_2_scaffold_340_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2287..3945)
DNA (1659bp) protein (553aa)
Trehalose-6-phosphate hydrolase {ECO:0000313|EMBL:KJZ84331.1}; EC=3.2.1.93 {ECO:0000313|EMBL:KJZ84331.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEM2_CLOBU rbh
NECEvent2014_8_2_scaffold_340_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4083..5495)
DNA (1413bp) protein (471aa)
treP; PTS system trehalose-specific transporter subunit IIBC (EC:2.7.1.69)
Pts system, trehalose-specific iibc component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD98_CLOBU rbh
Acetyltransferase {ECO:0000313|EMBL:KJZ89424.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_2_scaffold_340_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5861..6430)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYV5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32806.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_2_scaffold_340_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6515..7234)
DNA (720bp) protein (240aa)
Protein kinase domain protein n=2 Tax=Clostridium butyricum RepID=M8K7Z7_CLOBU rbh
Serine/threonine kinase {ECO:0000313|EMBL:KJZ84341.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
serine/threonine protein kinase
NECEvent2014_8_2_scaffold_340_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7265..7933)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4A6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87490.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
subtilisin-like serine protease
NECEvent2014_8_2_scaffold_340_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8180..8797
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEL7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89410.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_2_scaffold_340_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8992..10956)
DNA (1965bp) protein (655aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD94_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84321.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sensory transduction histidine kinase
NECEvent2014_8_2_scaffold_340_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11160..11726)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH20_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_2_scaffold_340_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11901..12656)
DNA (756bp) protein (252aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO
nagB; glucosamine-6-phosphate deaminase NagB (EC:3.5.99.6) rbh
Glucosamine-6-phosphate deaminase n=4 Tax=Clostridium butyricum RepID=B1QUJ6_CLOBU rbh
NECEvent2014_8_2_scaffold_340_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12924..13646
DNA (723bp) protein (241aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium butyricum RepID=C4ICI5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32071.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, RpiR family
NECEvent2014_8_2_scaffold_340_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13705..14367)
DNA (663bp) protein (221aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QUJ8_CLOBU rbh
Putative membrane-spanning protein {ECO:0000313|EMBL:KJZ84318.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
hypothetical protein
NECEvent2014_8_2_scaffold_340_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14520..15185
DNA (666bp) protein (222aa)
Cyclic nucleotide-binding protein n=2 Tax=Clostridium butyricum RepID=M8JD89_CLOBU rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KJZ84380.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
CRP (cyclic AMP receptor protein) regulatory protein
NECEvent2014_8_2_scaffold_340_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15265..16077
DNA (813bp) protein (271aa)
Exonuclease, RNase T and DNA polymerase III n=2 Tax=Clostridium butyricum RepID=B1QUK0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97533.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
exonuclease
NECEvent2014_8_2_scaffold_340_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16229..17737)
DNA (1509bp) protein (503aa)
UPF0371 protein CBDKU1_35280 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7Y7_CLOBU rbh
UPF0371 protein ClosIBUN125C_CONTIG63g03402 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_8_2_scaffold_340_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17954..20242)
DNA (2289bp) protein (763aa)
Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium butyricum RepID=B1QUK2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97524.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
NECEvent2014_8_2_scaffold_340_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20408..21331)
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
2-dehydropantoate 2-reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEK9_CLOBU rbh
2-dehydropantoate 2-reductase
Displaying 18 items

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