ggKbase home page

NECEvent2014_8_2_scaffold_477

Alias: 178_002_scaffold_477

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_477_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

130..1128
DNA (999bp) protein (333aa)
Catabolite control protein A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEE7_CLOBU rbh
Catabolite control protein A {ECO:0000313|EMBL:KHD15137.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
regA; HTH-type transcriptional regulator RegA
NECEvent2014_8_2_scaffold_477_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1288..1737
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=4 Tax=Clostridium butyricum RepID=B1R1Y0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29643.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, TrmB
NECEvent2014_8_2_scaffold_477_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1737..3116
DNA (1380bp) protein (460aa)
Mate efflux family protein n=2 Tax=Clostridium butyricum RepID=M8K968_CLOBU rbh
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ84668.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
mate efflux family protein
NECEvent2014_8_2_scaffold_477_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3176..3364)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84644.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_477_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3576..4151
DNA (576bp) protein (192aa)
Spore maturation protein A n=4 Tax=Clostridium butyricum RepID=C4IMI1_CLOBU rbh
Spore maturation protein A {ECO:0000313|EMBL:EEP52481.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. Bo
spmA; spore maturation protein A
NECEvent2014_8_2_scaffold_477_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4165..4689
DNA (525bp) protein (175aa)
Spore maturation protein B n=3 Tax=Clostridium butyricum RepID=C4IMI2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94925.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
spmB; spore maturation protein B
NECEvent2014_8_2_scaffold_477_7

Not on your lists

4800..6047
DNA (1248bp) protein (416aa)
pepP; Xaa-Pro aminopeptidase PepP (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=3 Tax=Clostridium butyricum RepID=B1R1X6_CLOBU rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:ETJ16566.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_8_2_scaffold_477_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6575..8296
DNA (1722bp) protein (574aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEL8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29637.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Na+/H+ antiporter family
NECEvent2014_8_2_scaffold_477_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8385..8897)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1X4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP52557.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_2_scaffold_477_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9616..11559
DNA (1944bp) protein (648aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Clostridium butyricum RepID=B1R1X3_CLOBU rbh
NECEvent2014_8_2_scaffold_477_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11741..13369
DNA (1629bp) protein (543aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEL4_CLOBU rbh
Suspect SCG annotation. See neighboring gene [NECEvent2014_8_2_scaffold_477_10].
NECEvent2014_8_2_scaffold_477_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13536..14321
DNA (786bp) protein (262aa)
Hydrolase, TatD family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K196_CLOBU rbh
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:KJZ84709.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;
Mg-dependent deoxyribonuclease TatD family
NECEvent2014_8_2_scaffold_477_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14754..15812
DNA (1059bp) protein (353aa)
G5/3D domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9C8_CLOBU rbh
Cell wall-binding protein {ECO:0000313|EMBL:KJZ84702.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
3D domain-containing protein
Displaying 13 items

View Taxonomy