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NECEvent2014_8_2_scaffold_545

Alias: 178_002_scaffold_545

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_545_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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236..1528
DNA (1293bp) protein (431aa)
Uracil permease n=3 Tax=Clostridium butyricum RepID=B1R0P8_CLOBU rbh
Uracil permease {ECO:0000313|EMBL:KJZ84018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uracil transporter
NECEvent2014_8_2_scaffold_545_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1803..3149
DNA (1347bp) protein (449aa)
UPI0003D5CD5B related cluster n=1 Tax=unknown RepID=UPI0003D5CD5B rbh
Berberine family protein {ECO:0000313|EMBL:ETI87701.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
berberine and berberine like family protein
NECEvent2014_8_2_scaffold_545_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3542..4378
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84025.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative short-chain dehydrogenase
NECEvent2014_8_2_scaffold_545_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4524..5261)
DNA (738bp) protein (246aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHP0_CLOBU rbh
NECEvent2014_8_2_scaffold_545_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5634..6509
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A778_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ93305.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
RpiR family transcriptional regulator
NECEvent2014_8_2_scaffold_545_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6635..7207)
DNA (573bp) protein (191aa)
Transcriptional regulatory protein DegU n=2 Tax=Clostridium butyricum RepID=B1R0Q1_CLOBU rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD14124.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
two component transcriptional regulator, LuxR family
NECEvent2014_8_2_scaffold_545_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7297..8490)
DNA (1194bp) protein (398aa)
UPI0003D5D381 related cluster n=1 Tax=unknown RepID=UPI0003D5D381 rbh
Histidine kinase protein {ECO:0000313|EMBL:ETI87698.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
integral membrane sensor signal transduction histidine kinase
NECEvent2014_8_2_scaffold_545_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8660..9946
DNA (1287bp) protein (429aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Clostridium butyricum RepID=C4IBW6_CLOBU rbh
Hemolysin D {ECO:0000313|EMBL:KHD14126.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RND family efflux transporter MFP subunit
NECEvent2014_8_2_scaffold_545_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9959..13060
DNA (3102bp) protein (1034aa)
Acriflavin resistance protein n=2 Tax=Clostridium butyricum RepID=M8J4Y3_CLOBU rbh
RND multidrug efflux transporter Acriflavin resistance protein {ECO:0000313|EMBL:KJZ84006.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
nolG3; nodulation protein NolG
NECEvent2014_8_2_scaffold_545_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13295..13933
DNA (639bp) protein (213aa)
UPI0003AA5D49 related cluster n=1 Tax=unknown RepID=UPI0003AA5D49 rbh
Nitroreductase family protein {ECO:0000313|EMBL:ETI87696.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1
nitroreductase
NECEvent2014_8_2_scaffold_545_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13975..14217)
DNA (243bp) protein (81aa)
MarR-family transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K0K8_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ84046.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
transcriptional regulator, MarR family
Displaying 11 items

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