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NECEvent2014_8_2_scaffold_623

Alias: 178_002_scaffold_623

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_623_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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620..859
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33259.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_2_scaffold_623_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1059..1928
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA38_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33258.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
radical SAM domain protein
NECEvent2014_8_2_scaffold_623_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2017..2607
DNA (591bp) protein (197aa)
Rubrerythrin n=3 Tax=Clostridium butyricum RepID=B1QXS9_CLOBU rbh
Rubrerythrin {ECO:0000313|EMBL:KJZ83694.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rbr; rubrerythrin
NECEvent2014_8_2_scaffold_623_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2715..3293
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXT0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83692.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_623_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3487..4089
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=4 Tax=Clostridium butyricum RepID=B1QXT1_CLOBU rbh
NECEvent2014_8_2_scaffold_623_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4238..5281
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridia
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Clostridium butyricum RepID=B1QXT2_CLOBU rbh
ruvB; Holliday junction DNA helicase RuvB
NECEvent2014_8_2_scaffold_623_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5439..6464
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:M
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridium butyricum RepID=M8JKY6_CLOBU rbh
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
NECEvent2014_8_2_scaffold_623_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6658..7794
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QXT4_CLOBU rbh
NECEvent2014_8_2_scaffold_623_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8063..8347
DNA (285bp) protein (95aa)
Preprotein translocase, YajC subunit n=3 Tax=Clostridium butyricum RepID=B1QXT5_CLOBU
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KJZ83700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
preprotein translocase, YajC subunit
NECEvent2014_8_2_scaffold_623_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8505..8879
DNA (375bp) protein (125aa)
UPI000399FD18 related cluster n=1 Tax=unknown RepID=UPI000399FD18
Membrane protein {ECO:0000313|EMBL:ETI91035.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
membrane protein
NECEvent2014_8_2_scaffold_623_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9265..10524
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
secD; protein translocase subunit SecD
NECEvent2014_8_2_scaffold_623_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10517..11386
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA31_CLOBU rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
secF; protein translocase subunit SecF
NECEvent2014_8_2_scaffold_623_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11517..12395
DNA (879bp) protein (293aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Phosphoesterase, RecJ domain protein n=2 Tax=Clostridium butyricum RepID=C4IKU0_CLOBU rbh
Phosphoesterase, RecJ domain protein {ECO:0000313|EMBL:EEP53743.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
Displaying 13 items

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