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NECEvent2014_8_2_scaffold_646

Alias: 178_002_scaffold_646

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_646_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(92..937)
DNA (846bp) protein (282aa)
Transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QW74_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32724.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RpiR family transcriptional regulator
NECEvent2014_8_2_scaffold_646_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(967..2049)
DNA (1083bp) protein (361aa)
Outer surface protein n=3 Tax=Clostridium butyricum RepID=B1QW75_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85584.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_646_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2065..3273)
DNA (1209bp) protein (403aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7U2_CLOBU rbh
NECEvent2014_8_2_scaffold_646_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3248..4144)
DNA (897bp) protein (299aa)
ATPase family protein n=4 Tax=Clostridium butyricum RepID=B1QW77_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85611.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
BadF/BadG/BcrA/BcrD type ATPase
NECEvent2014_8_2_scaffold_646_5
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4316..5284)
DNA (969bp) protein (323aa)
Tat pathway signal sequence n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMF1_9BACT
Tat pathway signal sequence {ECO:0000313|EMBL:CDE40824.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prev
Tat (twin-arginine translocation) pathway signal sequence
NECEvent2014_8_2_scaffold_646_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5389..5685)
DNA (297bp) protein (99aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QW78_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85601.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_2_scaffold_646_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5756..6061)
DNA (306bp) protein (102aa)
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:EEP56108.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP56108.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Lichenan-specific phosphotransferase enzyme iia component n=2 Tax=Clostridium butyricum RepID=B1QW79_CLOBU
PTS system lactose/cellobiose-specific transporter subunit IIA
NECEvent2014_8_2_scaffold_646_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6082..7392)
DNA (1311bp) protein (437aa)
6-phospho-beta-glucosidase (Cellobiose-6-phosphatehydrolase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J450_CLOBU rbh
Diacetylchitobiose-6-phosphate hydrolase {ECO:0000313|EMBL:KHD14443.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
glycoside hydrolase
NECEvent2014_8_2_scaffold_646_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7473..8726)
DNA (1254bp) protein (418aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1QW81_CLOBU rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
PTS system lactose/cellobiose family IIC subunit
NECEvent2014_8_2_scaffold_646_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8754..9149)
DNA (396bp) protein (132aa)
PTS system, diacetylchitobiose-specific IIB component n=4 Tax=Clostridium butyricum RepID=B1QW82_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85609.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphotransferase system, lactose/cellobiose-specific IIB subunit
NECEvent2014_8_2_scaffold_646_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9112..10017)
DNA (906bp) protein (302aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid-6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase n=4 Tax=Clostridium butyricum RepID=B1QW83_CLOBU rbh
NECEvent2014_8_2_scaffold_646_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10582..11007)
DNA (426bp) protein (142aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEG7_CLOBU
Acetyltransferase {ECO:0000313|EMBL:KJZ85599.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-related N-acetyltransferase
NECEvent2014_8_2_scaffold_646_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11205..12071)
DNA (867bp) protein (289aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J454_CLOBU rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ETI88375.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DOR
NAD-dependent epimerase/dehydratase
Displaying 13 items

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