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NECEvent2014_8_2_scaffold_711

Alias: 178_002_scaffold_711

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_711_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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488..1465
DNA (978bp) protein (326aa)
PTS system, mannose-specific IIB component/PTS system, mannose-specific IIA component {ECO:0000313|EMBL:KJZ84034.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ84034.1};; TaxID=1523154 species="Bacteria; Firmic
Pts system mannose-specific eiiab component n=4 Tax=Clostridium butyricum RepID=B1R0Q8_CLOBU rbh
PTS system sorbose subfamily transporter subunit IIB
NECEvent2014_8_2_scaffold_711_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1499..2305
DNA (807bp) protein (269aa)
PTS system sorbose-specific iic component n=2 Tax=Clostridium butyricum RepID=M8J4Y9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32274.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system sorbose-specific transporter subunit IIC
NECEvent2014_8_2_scaffold_711_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2324..3235
DNA (912bp) protein (304aa)
IIDman n=4 Tax=Clostridium butyricum RepID=B1R0R0_CLOBU rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ENZ32273.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_8_2_scaffold_711_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3440..3814
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0R1_CLOBU
Putative regulator of the mannose operon, ManO {ECO:0000313|EMBL:KJZ84037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_8_2_scaffold_711_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4091..6067
DNA (1977bp) protein (659aa)
Beta-lactamase {ECO:0000313|EMBL:KJZ84017.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KJZ84017.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD4_CLOBU rbh
beta-lactamase
NECEvent2014_8_2_scaffold_711_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6086..6865
DNA (780bp) protein (260aa)
Two-component system response regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84032.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
regulatory protein VanR
NECEvent2014_8_2_scaffold_711_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6891..7949
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AHM7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84028.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component sensor histidine kinase
NECEvent2014_8_2_scaffold_711_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8017..8913)
DNA (897bp) protein (299aa)
UPI0003D5F3D9 related cluster n=1 Tax=unknown RepID=UPI0003D5F3D9 rbh
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KJZ84052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
protein of unknown function DUF6 transmembrane
NECEvent2014_8_2_scaffold_711_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9057..9953
DNA (897bp) protein (299aa)
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EP89_CLOPA rbh
Helix-turn-helix, AraC type {ECO:0000313|EMBL:KJZ92122.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
helix-turn-helix domain-containing protein
NECEvent2014_8_2_scaffold_711_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10080..11198)
DNA (1119bp) protein (373aa)
Putative methyl-accepting chemotaxis protein (MCP) signaling domain n=2 Tax=Clostridium butyricum RepID=B1R0R6_CLOBU rbh
Chemotaxis protein {ECO:0000313|EMBL:KHD14138.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
Displaying 10 items

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