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NECEvent2014_8_2_scaffold_1448

Alias: 178_002_scaffold_1448

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_1448_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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153..521
DNA (369bp) protein (123aa)
UPF0102 protein HMPREF1084_00592 n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATB6_CLOBU
UPF0102 protein ClosIBUN22A_CONTIG150g03124 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_8_2_scaffold_1448_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(576..1397)
DNA (822bp) protein (274aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=4 Tax=Clostridium butyricum RepID=B1QSI9_CLOBU rbh
NECEvent2014_8_2_scaffold_1448_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1384..2265)
DNA (882bp) protein (294aa)
Ribosome biogenesis GTPase A n=5 Tax=Clostridium butyricum RepID=B1QSI8_CLOBU rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
rbgA; ribosome biogenesis GTPase A
NECEvent2014_8_2_scaffold_1448_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2576..2926)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=4 Tax=Clostridium butyricum RepID=B1QSI7_CLOBU
50S ribosomal protein L19 {ECO:0000313|EMBL:KHD16748.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
rplS; 50S ribosomal protein L19
NECEvent2014_8_2_scaffold_1448_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3060..3779)
DNA (720bp) protein (240aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Clostridium butyricum RepID=M8KCN2_CLOBU rbh
NECEvent2014_8_2_scaffold_1448_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3769..4269)
DNA (501bp) protein (167aa)
Ribosome maturation factor RimM n=2 Tax=Clostridium butyricum RepID=C4IJE3_CLOBU rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
rimM; ribosome maturation factor RimM
NECEvent2014_8_2_scaffold_1448_7
unknown

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comp(4288..4374)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 7 items

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