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NECEvent2014_8_2_scaffold_454

Alias: 178_002_scaffold_454

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_454_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..392
DNA (390bp) protein (130aa)
FHA domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CSD2_CLOPF
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:EDT16728.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;
NECEvent2014_8_2_scaffold_454_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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406..1635
DNA (1230bp) protein (410aa)
Cell cycle protein FtsW n=6 Tax=Clostridium perfringens RepID=H7CSD3_CLOPF rbh
cell cycle protein FtsW
Probable cell division protein {ECO:0000313|EMBL:BAB80056.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_8_2_scaffold_454_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1636..3099
DNA (1464bp) protein (488aa)
Probable penicillin-binding protein n=6 Tax=Clostridium perfringens RepID=Q8XNI2_CLOPE rbh
penicillin-binding protein
Putative penicillin-binding protein {ECO:0000313|EMBL:EDS79866.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_2_scaffold_454_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3253..5118
DNA (1866bp) protein (622aa)
UvrABC system protein C n=3 Tax=Clostridium perfringens RepID=UVRC_CLOP1 rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
NECEvent2014_8_2_scaffold_454_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5267..6181
DNA (915bp) protein (305aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=7 Tax=Clostridium perfringens RepID=MURB_CLOP1 rbh
NECEvent2014_8_2_scaffold_454_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6421..7365
DNA (945bp) protein (315aa)
UPF0042 nucleotide-binding protein CPR_0335 n=9 Tax=Clostridium perfringens RepID=Y335_CLOPS rbh
hypothetical protein
Nucleotide-binding protein CPF_0343 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_8_2_scaffold_454_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7305..8648
DNA (1344bp) protein (448aa)
Putative gluconeogenesis factor n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW35_CLOPS rbh
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_2_scaffold_454_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8651..9601
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=9 Tax=Clostridium perfringens RepID=WHIA_CLOP1 rbh
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
NECEvent2014_8_2_scaffold_454_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9775..10329
DNA (555bp) protein (185aa)
Putative lioprotein n=4 Tax=Clostridium perfringens RepID=H7CSE0_CLOPF rbh
Putative lioprotein {ECO:0000313|EMBL:EIA18462.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lioprotein
NECEvent2014_8_2_scaffold_454_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10463..11707)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDR4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT27914.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_8_2_scaffold_454_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11721..12257)
DNA (537bp) protein (179aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridium perfringens RepID=H1CUN4_CLOPF rbh
RNA polymerase ECF-type sigma factor
Probable RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAB80065.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_8_2_scaffold_454_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12726..16304
DNA (3579bp) protein (1193aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNU9_CLOPF rbh
Displaying 12 items

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