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NECEvent2014_8_2_scaffold_476

Alias: 178_002_scaffold_476

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_476_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(292..576)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWQ6_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86477.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_2_scaffold_476_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1255..2676)
DNA (1422bp) protein (474aa)
Putative thiazole biosynthesis protein ThiH n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFJ6_CLOPF rbh
Putative thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDT27316.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
thiH; thiamine biosynthesis protein ThiH rbh
NECEvent2014_8_2_scaffold_476_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2782..3033)
DNA (252bp) protein (84aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRQ8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18652.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_2_scaffold_476_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3477..5042
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP53_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79818.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_2_scaffold_476_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5191..5418
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRR0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27373.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_2_scaffold_476_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5702..5926
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWQ1_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85881.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_2_scaffold_476_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5986..6945)
DNA (960bp) protein (320aa)
N-acetylmuramoyl-L-alanine amidase domain-containing protein (EC:3.5.1.28)
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABG87282.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABG87282.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWQ0_CLOPS rbh
NECEvent2014_8_2_scaffold_476_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6958..8127)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUW4_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15493.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_2_scaffold_476_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8139..9389)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XP48_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79823.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_2_scaffold_476_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9505..10305
DNA (801bp) protein (267aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XP47_CLOPE rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15503.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_8_2_scaffold_476_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10445..11131
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW87_CLOPF rbh
DNA-binding response regulator {ECO:0000313|EMBL:EDT22372.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B st
two-component response regulator
NECEvent2014_8_2_scaffold_476_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11122..12135
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSL6_CLOPF rbh
two-component sensor histidine kinase
NECEvent2014_8_2_scaffold_476_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12262..12459
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSL8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18559.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_8_2_scaffold_476_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12991..13761
DNA (771bp) protein (257aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4K6_CLOPF rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT71272.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
ABC transporter ATP-binding protein
NECEvent2014_8_2_scaffold_476_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13751..15778
DNA (2028bp) protein (676aa)
Putative ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=B1RBK8_CLOPF rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDT22386.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
ABC transporter permease
Displaying 15 items

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