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NECEvent2014_8_2_scaffold_682

Alias: 178_002_scaffold_682

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_2_scaffold_682_trna_1
unknown

Not on your lists

147..227
DNA (81bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_2
unknown

Not on your lists

236..306
DNA (71bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_3
unknown

Not on your lists

327..398
DNA (72bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_4
unknown

Not on your lists

407..477
DNA (71bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_5
unknown

Not on your lists

499..571
DNA (73bp)
transferRNA
NECEvent2014_8_2_scaffold_682_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1047..2285
DNA (1239bp) protein (413aa)
Lipase/acylhydrolase family protein n=2 Tax=Clostridium perfringens RepID=Q0TMX9_CLOP1 rbh
hypothetical protein
Lipase/acylhydrolase family protein {ECO:0000313|EMBL:EDT27441.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_2_scaffold_682_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2344..2748)
DNA (405bp) protein (135aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CZ25_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15985.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_2_scaffold_682_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2938..3630
DNA (693bp) protein (231aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZ24_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15910.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_2_scaffold_682_trna_6
unknown

Not on your lists

3756..3829
DNA (74bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_7
unknown

Not on your lists

3836..3907
DNA (72bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_8
unknown

Not on your lists

3976..4046
DNA (71bp)
transferRNA
NECEvent2014_8_2_scaffold_682_trna_9
unknown

Not on your lists

4094..4166
DNA (73bp)
transferRNA
NECEvent2014_8_2_scaffold_682_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4305..5147
DNA (843bp) protein (281aa)
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Putative pyridoxal kinase n=3 Tax=Clostridium perfringens RepID=Q0TMY2_CLOP1 rbh
NECEvent2014_8_2_scaffold_682_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5484..6797
DNA (1314bp) protein (438aa)
Na+/H+ antiporter family protein n=2 Tax=Clostridium perfringens RepID=B1BQH4_CLOPF rbh
Na+/H+ antiporter family protein
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EDT16036.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_8_2_scaffold_682_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6973..7443)
DNA (471bp) protein (157aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Clostridium perfringens RepID=B1BMR6_CLOPF rbh
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
NECEvent2014_8_2_scaffold_682_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7793..8470
DNA (678bp) protein (226aa)
Sortase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7R9_CLOPF rbh
Sortase family protein {ECO:0000313|EMBL:EDT23719.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
sortase
NECEvent2014_8_2_scaffold_682_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8531..9544
DNA (1014bp) protein (338aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XI10_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16006.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_2_scaffold_682_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9566..10462
DNA (897bp) protein (299aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7S1_CLOPF rbh
RNA pseudouridine synthase
NECEvent2014_8_2_scaffold_682_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10704..11645)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQN4_CLOPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85426.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
Displaying 19 items

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