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NECEvent2014_8_2_Enterobacteriales_53_7_hint

NECEvent2014_8_2_Enterobacteriales_53_7
In projects: NECEvent2014_8_2

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Refined from TS ESOM

Displaying items 1-50 of 1344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_1095 178_002_scaffold_1095
Order: Enterobacteriales (100%)
8 6542 bp 52.74 7.89 83.55
NECEvent2014_8_2_scaffold_931 178_002_scaffold_931
Order: Enterobacteriales (100%)
8 8223 bp 53.25 6.20 89.75
NECEvent2014_8_2_scaffold_1566 178_002_scaffold_1566
Genus: Enterobacter (57.14%)
7 3930 bp 51.45 7.02 89.54
NECEvent2014_8_2_scaffold_1613 178_002_scaffold_1613
Order: Enterobacteriales (100%)
7 3783 bp 53.32 7.41 93.89
NECEvent2014_8_2_scaffold_2404 178_002_scaffold_2404
Species: Escherichia coli (57.14%)
7 2052 bp 54.14 4.97 97.95
NECEvent2014_8_2_scaffold_1474 178_002_scaffold_1474
Genus: Kosakonia (71.43%)
7 4291 bp 53.23 6.96 95.15
NECEvent2014_8_2_scaffold_1760 178_002_scaffold_1760
Genus: Enterobacter (57.14%)
7 3267 bp 49.92 9.32 87.60
NECEvent2014_8_2_scaffold_2062 178_002_scaffold_2062
Order: Enterobacteriales (100%)
6 2587 bp 48.82 6.15 97.64
NECEvent2014_8_2_scaffold_1829 178_002_scaffold_1829
Species: Kosakonia radicincitans (50%)
6 3082 bp 51.49 6.96 72.91
NECEvent2014_8_2_scaffold_1335 178_002_scaffold_1335
Species: Klebsiella oxytoca (50%)
6 4921 bp 56.51 7.99 94.74
NECEvent2014_8_2_scaffold_1342 178_002_scaffold_1342
Genus: Citrobacter (50%)
6 4895 bp 55.10 7.54 97.63
NECEvent2014_8_2_scaffold_1859 178_002_scaffold_1859
Genus: Enterobacter (50%)
6 2985 bp 48.07 6.13 70.75
NECEvent2014_8_2_scaffold_1107 178_002_scaffold_1107
Genus: Enterobacter (66.67%)
6 6405 bp 52.51 9.46 89.98
NECEvent2014_8_2_scaffold_2138 178_002_scaffold_2138
Genus: Kosakonia (50%)
6 2469 bp 52.81 8.14 83.11
NECEvent2014_8_2_scaffold_1662 178_002_scaffold_1662
Order: Enterobacteriales (100%)
6 3591 bp 50.43 7.14 82.46
NECEvent2014_8_2_scaffold_1676 178_002_scaffold_1676
Order: Enterobacteriales (66.67%)
6 3531 bp 51.20 6.80 85.64
NECEvent2014_8_2_scaffold_1936 178_002_scaffold_1936
Species: Enterobacter cloacae (50%)
6 2820 bp 52.06 6.17 95.32
NECEvent2014_8_2_scaffold_2277 178_002_scaffold_2277
Species: Kosakonia radicincitans (50%)
6 2246 bp 51.38 4.27 87.49
NECEvent2014_8_2_scaffold_1768 178_002_scaffold_1768
Genus: Citrobacter (50%)
6 3240 bp 54.63 6.67 86.85
NECEvent2014_8_2_scaffold_1578 178_002_scaffold_1578
Genus: Enterobacter (60%)
5 3882 bp 54.17 5.26 96.68
NECEvent2014_8_2_scaffold_1844 178_002_scaffold_1844
Order: Enterobacteriales (100%)
5 3036 bp 56.79 7.16 94.57
NECEvent2014_8_2_scaffold_1604 178_002_scaffold_1604
Species: Klebsiella oxytoca (80%)
5 3803 bp 53.06 8.01 73.36
NECEvent2014_8_2_scaffold_1360 178_002_scaffold_1360
Order: Enterobacteriales (80%)
5 4839 bp 53.42 7.44 86.55
NECEvent2014_8_2_scaffold_1617 178_002_scaffold_1617
Genus: Enterobacter (80%)
5 3771 bp 52.85 7.56 92.12
NECEvent2014_8_2_scaffold_1620 178_002_scaffold_1620
Class: Gammaproteobacteria (80%)
5 3735 bp 53.07 7.87 92.29
NECEvent2014_8_2_scaffold_1884 178_002_scaffold_1884
Species: Kosakonia radicincitans (60%)
5 2941 bp 50.97 7.40 84.16
NECEvent2014_8_2_scaffold_1394 178_002_scaffold_1394
Species: Kosakonia sacchari (60%)
5 4685 bp 59.70 7.04 93.11
NECEvent2014_8_2_scaffold_1670 178_002_scaffold_1670
Order: Enterobacteriales (100%)
5 3553 bp 55.16 7.77 91.87
NECEvent2014_8_2_scaffold_1162 178_002_scaffold_1162
Species: Kosakonia radicincitans (60%)
5 5893 bp 46.85 6.87 89.09
NECEvent2014_8_2_scaffold_1934 178_002_scaffold_1934
Order: Enterobacteriales (100%)
5 2826 bp 55.06 6.16 83.55
NECEvent2014_8_2_scaffold_1680 178_002_scaffold_1680
Species: Kosakonia sacchari (60%)
5 3522 bp 55.00 5.62 96.76
NECEvent2014_8_2_scaffold_2198 178_002_scaffold_2198
Order: Enterobacteriales (100%)
5 2368 bp 51.27 4.05 75.89
NECEvent2014_8_2_scaffold_1442 178_002_scaffold_1442
Genus: Enterobacter (60%)
5 4395 bp 55.97 7.68 94.68
NECEvent2014_8_2_scaffold_1698 178_002_scaffold_1698
Order: Enterobacteriales (80%)
5 3463 bp 52.50 8.79 86.80
NECEvent2014_8_2_scaffold_1707 178_002_scaffold_1707
Order: Enterobacteriales (80%)
5 3431 bp 54.88 6.08 94.08
NECEvent2014_8_2_scaffold_1453 178_002_scaffold_1453
Species: Enterobacter sp. R4-368 (60%)
5 4360 bp 56.93 6.06 92.89
NECEvent2014_8_2_scaffold_1973 178_002_scaffold_1973
Genus: Enterobacter (60%)
5 2724 bp 51.54 5.78 100.44
NECEvent2014_8_2_scaffold_957 178_002_scaffold_957
Genus: Kosakonia (60%)
5 7999 bp 52.96 6.51 86.82
NECEvent2014_8_2_scaffold_2238 178_002_scaffold_2238
Genus: Enterobacter (60%)
5 2299 bp 55.42 7.70 98.26
NECEvent2014_8_2_scaffold_2003 178_002_scaffold_2003
Genus: Citrobacter (60%)
5 2663 bp 57.64 7.89 95.08
NECEvent2014_8_2_scaffold_2287 178_002_scaffold_2287
Order: Enterobacteriales (80%)
5 2234 bp 53.09 5.98 84.20
NECEvent2014_8_2_scaffold_2546 178_002_scaffold_2546 5 1892 bp 43.55 7.06 60.89
NECEvent2014_8_2_scaffold_1267 178_002_scaffold_1267
Genus: Proteus (60%)
5 5325 bp 52.36 8.34 95.10
NECEvent2014_8_2_scaffold_2044 178_002_scaffold_2044
Order: Enterobacteriales (100%)
5 2613 bp 52.58 5.97 81.52
NECEvent2014_8_2_scaffold_2815 178_002_scaffold_2815
Order: Enterobacteriales (60%)
5 1658 bp 52.90 6.33 95.54
NECEvent2014_8_2_scaffold_1536 178_002_scaffold_1536
Order: Enterobacteriales (100%)
5 4061 bp 52.60 10.12 76.61
NECEvent2014_8_2_scaffold_1794 178_002_scaffold_1794
Genus: Kosakonia (80%)
5 3173 bp 55.44 8.46 95.21
NECEvent2014_8_2_scaffold_2051 178_002_scaffold_2051
Species: Kosakonia sacchari (60%)
5 2599 bp 58.21 4.79 102.50
NECEvent2014_8_2_scaffold_1544 178_002_scaffold_1544
Order: Enterobacteriales (100%)
5 4012 bp 54.91 10.62 90.63
NECEvent2014_8_2_scaffold_2059 178_002_scaffold_2059
Order: Enterobacteriales (80%)
5 2588 bp 53.52 8.81 86.82
Displaying items 1-50 of 1344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.