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NECEvent2014_8_2_Enterobacteriales_53_7_hint

NECEvent2014_8_2_Enterobacteriales_53_7
In projects: NECEvent2014_8_2

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Refined from TS ESOM

Displaying items 1151-1200 of 1344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_3063 178_002_scaffold_3063
Order: Enterobacteriales (66.67%)
3 1494 bp 49.67 5.22 69.28
NECEvent2014_8_2_scaffold_3616 178_002_scaffold_3616
Species: Enterobacter sp. R4-368 (50%)
2 1207 bp 53.60 5.22 96.44
NECEvent2014_8_2_scaffold_2932 178_002_scaffold_2932
Order: Enterobacteriales (100%)
3 1584 bp 50.69 5.21 61.17
NECEvent2014_8_2_scaffold_3768 178_002_scaffold_3768
Species: Escherichia coli (50%)
2 1152 bp 54.69 5.21 98.70
NECEvent2014_8_2_scaffold_3769 178_002_scaffold_3769
Species: Klebsiella pneumoniae (50%)
2 1152 bp 56.16 5.21 100.00
NECEvent2014_8_2_scaffold_1805 178_002_scaffold_1805
Species: Escherichia coli (100%)
3 3139 bp 32.56 5.21 97.10
NECEvent2014_8_2_scaffold_4087 178_002_scaffold_4087
Species: Citrobacter rodentium (50%)
2 1039 bp 51.30 5.20 75.07
NECEvent2014_8_2_scaffold_2165 178_002_scaffold_2165
Species: Enterobacter sp. YD4 (75%)
4 2428 bp 54.45 5.19 95.02
NECEvent2014_8_2_scaffold_3466 178_002_scaffold_3466
Genus: Enterobacter (66.67%)
3 1275 bp 55.53 5.18 91.76
NECEvent2014_8_2_scaffold_2505 178_002_scaffold_2505
Species: Escherichia coli (66.67%)
3 1939 bp 41.16 5.18 82.62
NECEvent2014_8_2_scaffold_1872 178_002_scaffold_1872
Species: Citrobacter freundii (50%)
4 2960 bp 54.05 5.17 96.59
NECEvent2014_8_2_scaffold_3459 178_002_scaffold_3459
Species: Klebsiella sp. (50%)
2 1276 bp 49.29 5.17 79.23
NECEvent2014_8_2_scaffold_3039 178_002_scaffold_3039
Species: Kosakonia radicincitans (50%)
2 1508 bp 54.84 5.17 91.91
NECEvent2014_8_2_scaffold_3979 178_002_scaffold_3979
Genus: Enterobacter (66.67%)
3 1076 bp 53.44 5.16 85.04
NECEvent2014_8_2_scaffold_2997 178_002_scaffold_2997
Order: Enterobacteriales (100%)
3 1541 bp 55.22 5.16 87.22
NECEvent2014_8_2_scaffold_3335 178_002_scaffold_3335
Species: Enterobacter sp. YD4 (50%)
2 1338 bp 55.08 5.16 95.07
NECEvent2014_8_2_scaffold_3718 178_002_scaffold_3718
Species: Enterobacter sp. R4-368 (66.67%)
3 1169 bp 52.87 5.13 86.74
NECEvent2014_8_2_scaffold_2938 178_002_scaffold_2938
Species: Serratia nematodiphila (50%)
2 1579 bp 46.87 5.13 76.76
NECEvent2014_8_2_scaffold_3560 178_002_scaffold_3560
Species: Enterobacter cloacae (50%)
2 1228 bp 55.86 5.13 97.96
NECEvent2014_8_2_scaffold_2771 178_002_scaffold_2771
Species: Kosakonia sacchari (50%)
2 1695 bp 55.75 5.13 92.39
NECEvent2014_8_2_scaffold_3024 178_002_scaffold_3024
Order: Enterobacteriales (100%)
3 1522 bp 45.86 5.12 77.46
NECEvent2014_8_2_scaffold_2027 178_002_scaffold_2027
Order: Enterobacteriales (100%)
3 2636 bp 56.79 5.12 85.47
NECEvent2014_8_2_scaffold_3871 178_002_scaffold_3871
Species: Serratia odorifera (100%)
1 1113 bp 52.83 5.12 100.00
NECEvent2014_8_2_scaffold_3218 178_002_scaffold_3218
Species: Enterobacter asburiae (50%)
2 1409 bp 50.18 5.11 75.80
NECEvent2014_8_2_scaffold_4040 178_002_scaffold_4040
Species: Escherichia hermannii (100%)
1 1057 bp 55.06 5.11 99.91
NECEvent2014_8_2_scaffold_3107 178_002_scaffold_3107
Species: Kosakonia sacchari (100%)
1 1469 bp 52.96 5.11 99.86
NECEvent2014_8_2_scaffold_2833 178_002_scaffold_2833
Species: Kosakonia radicincitans (50%)
2 1646 bp 57.53 5.10 93.86
NECEvent2014_8_2_scaffold_3700 178_002_scaffold_3700
Species: Rahnella aquatilis (50%)
2 1177 bp 55.56 5.10 90.23
NECEvent2014_8_2_scaffold_3012 178_002_scaffold_3012
Species: Serratia plymuthica (50%)
2 1530 bp 53.01 5.10 72.35
NECEvent2014_8_2_scaffold_4037 178_002_scaffold_4037
Species: Enterobacter lignolyticus (50%)
2 1058 bp 49.15 5.10 78.54
NECEvent2014_8_2_scaffold_3849 178_002_scaffold_3849
Species: Citrobacter koseri (100%)
1 1119 bp 55.41 5.09 100.00
NECEvent2014_8_2_scaffold_3410 178_002_scaffold_3410
Species: Enterobacter sp. YD4 (100%)
1 1300 bp 55.62 5.08 99.69
NECEvent2014_8_2_scaffold_3414 178_002_scaffold_3414
Genus: Enterobacter (66.67%)
3 1298 bp 51.46 5.08 97.30
NECEvent2014_8_2_scaffold_4030 178_002_scaffold_4030
Species: Escherichia coli (100%)
1 1062 bp 41.24 5.08 100.00
NECEvent2014_8_2_scaffold_3830 178_002_scaffold_3830
Species: Enterobacter sp. R4-368 (100%)
1 1123 bp 56.01 5.08 95.37
NECEvent2014_8_2_scaffold_3089 178_002_scaffold_3089
Order: Enterobacteriales (66.67%)
3 1477 bp 45.63 5.08 71.70
NECEvent2014_8_2_scaffold_3191 178_002_scaffold_3191
Species: Kosakonia sacchari (100%)
1 1423 bp 56.15 5.06 99.72
NECEvent2014_8_2_scaffold_3084 178_002_scaffold_3084
Species: Kosakonia sacchari (66.67%)
3 1481 bp 60.57 5.06 100.47
NECEvent2014_8_2_scaffold_2814 178_002_scaffold_2814
Species: Cedecea neteri (50%)
2 1661 bp 55.87 5.06 87.06
NECEvent2014_8_2_scaffold_2585 178_002_scaffold_2585
Species: Salmonella enterica (50%)
2 1843 bp 47.21 5.05 59.25
NECEvent2014_8_2_scaffold_2906 178_002_scaffold_2906
Species: Kosakonia radicincitans (100%)
2 1605 bp 47.48 5.05 96.07
NECEvent2014_8_2_scaffold_4195 178_002_scaffold_4195
Species: Kosakonia sacchari (100%)
1 1010 bp 52.97 5.05 71.58
NECEvent2014_8_2_scaffold_3656 178_002_scaffold_3656
Species: Nitrosomonas eutropha (50%)
2 1190 bp 39.24 5.04 72.61
NECEvent2014_8_2_scaffold_2118 178_002_scaffold_2118
Species: Kosakonia radicincitans (66.67%)
3 2500 bp 48.32 5.04 80.88
NECEvent2014_8_2_scaffold_2153 178_002_scaffold_2153
Species: Kosakonia sacchari (66.67%)
3 2441 bp 57.80 5.04 91.93
NECEvent2014_8_2_scaffold_3179 178_002_scaffold_3179
Species: Escherichia hermannii (50%)
2 1430 bp 55.80 5.03 99.65
NECEvent2014_8_2_scaffold_2306 178_002_scaffold_2306
Order: Enterobacteriales (100%)
3 2208 bp 55.48 5.03 99.32
NECEvent2014_8_2_scaffold_2795 178_002_scaffold_2795
Species: Cedecea davisae (50%)
2 1674 bp 56.57 5.02 80.47
NECEvent2014_8_2_scaffold_4171 178_002_scaffold_4171
Species: Klebsiella pneumoniae (50%)
2 1017 bp 45.53 5.01 48.97
NECEvent2014_8_2_scaffold_3962 178_002_scaffold_3962
Species: Kosakonia radicincitans (100%)
1 1081 bp 45.42 5.00 91.58
Displaying items 1151-1200 of 1344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.