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NECEvent2014_8_2_Enterobacteriales_53_7_hint

NECEvent2014_8_2_Enterobacteriales_53_7
In projects: NECEvent2014_8_2

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Refined from TS ESOM

Displaying items 201-250 of 1344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_3552 178_002_scaffold_3552
Species: Enterobacter sp. YD4 (100%)
1 1233 bp 55.07 7.79 72.02
NECEvent2014_8_2_scaffold_2301 178_002_scaffold_2301
Order: Enterobacteriales (100%)
3 2214 bp 53.07 7.79 89.57
NECEvent2014_8_2_scaffold_3351 178_002_scaffold_3351
Species: Escherichia coli (100%)
1 1328 bp 53.69 7.79 88.33
NECEvent2014_8_2_scaffold_3640 178_002_scaffold_3640
Species: Enterobacter lignolyticus (50%)
2 1195 bp 55.40 7.78 91.88
NECEvent2014_8_2_scaffold_2459 178_002_scaffold_2459
Species: Buttiauxella agrestis (50%)
2 1987 bp 41.82 7.78 19.98
NECEvent2014_8_2_scaffold_2367 178_002_scaffold_2367
Species: Enterobacter cloacae (100%)
2 2124 bp 55.56 7.77 92.09
NECEvent2014_8_2_scaffold_1670 178_002_scaffold_1670
Order: Enterobacteriales (100%)
5 3553 bp 55.16 7.77 91.87
NECEvent2014_8_2_scaffold_4215 178_002_scaffold_4215
Species: Enterobacteriaceae bacterium strain FGI 57 (50%)
2 1004 bp 56.47 7.77 94.72
NECEvent2014_8_2_scaffold_1958 178_002_scaffold_1958
Order: Enterobacteriales (100%)
4 2765 bp 53.27 7.76 96.46
NECEvent2014_8_2_scaffold_4201 178_002_scaffold_4201
Species: Cronobacter sakazakii (100%)
1 1007 bp 39.92 7.75 71.20
NECEvent2014_8_2_scaffold_4203 178_002_scaffold_4203
Species: Enterobacter sp. R4-368 (100%)
1 1007 bp 55.81 7.75 99.80
NECEvent2014_8_2_scaffold_3173 178_002_scaffold_3173
Species: Dickeya zeae (50%)
2 1434 bp 49.16 7.74 79.50
NECEvent2014_8_2_scaffold_3949 178_002_scaffold_3949
Species: Siccibacter turicensis (50%)
2 1085 bp 53.92 7.74 88.76
NECEvent2014_8_2_scaffold_3625 178_002_scaffold_3625
Species: Enterobacter sp. 42324 (100%)
1 1203 bp 56.69 7.73 94.26
NECEvent2014_8_2_scaffold_4011 178_002_scaffold_4011
Species: Kosakonia radicincitans (100%)
1 1067 bp 53.61 7.73 99.81
NECEvent2014_8_2_scaffold_3827 178_002_scaffold_3827
Species: Kosakonia sacchari (50%)
2 1125 bp 54.76 7.73 88.80
NECEvent2014_8_2_scaffold_2273 178_002_scaffold_2273
Genus: Enterobacter (66.67%)
3 2251 bp 49.13 7.73 97.96
NECEvent2014_8_2_scaffold_2858 178_002_scaffold_2858
Species: Kosakonia radicincitans (100%)
1 1632 bp 56.37 7.72 92.28
NECEvent2014_8_2_scaffold_3667 178_002_scaffold_3667
Order: Enterobacteriales (75%)
4 1186 bp 51.26 7.72 88.53
NECEvent2014_8_2_scaffold_3090 178_002_scaffold_3090
Species: Enterobacter asburiae (50%)
2 1477 bp 46.92 7.72 70.28
NECEvent2014_8_2_scaffold_3444 178_002_scaffold_3444
Species: Cronobacter dublinensis (50%)
2 1284 bp 51.25 7.71 84.11
NECEvent2014_8_2_scaffold_3002 178_002_scaffold_3002
Species: Klebsiella pneumoniae (100%)
1 1536 bp 57.81 7.71 94.34
NECEvent2014_8_2_scaffold_1734 178_002_scaffold_1734
Order: Enterobacteriales (100%)
3 3345 bp 56.14 7.71 92.56
NECEvent2014_8_2_scaffold_3365 178_002_scaffold_3365
Species: Kosakonia radicincitans (50%)
2 1323 bp 49.74 7.71 44.22
NECEvent2014_8_2_scaffold_3657 178_002_scaffold_3657
Species: Enterobacter asburiae (50%)
2 1189 bp 52.82 7.70 73.93
NECEvent2014_8_2_scaffold_4179 178_002_scaffold_4179
Species: Enterobacter sp. R4-368 (100%)
1 1013 bp 59.33 7.70 99.80
NECEvent2014_8_2_scaffold_2238 178_002_scaffold_2238
Genus: Enterobacter (60%)
5 2299 bp 55.42 7.70 98.26
NECEvent2014_8_2_scaffold_3932 178_002_scaffold_3932
Species: Klebsiella pneumoniae (50%)
2 1093 bp 52.42 7.69 97.44
NECEvent2014_8_2_scaffold_1442 178_002_scaffold_1442
Genus: Enterobacter (60%)
5 4395 bp 55.97 7.68 94.68
NECEvent2014_8_2_scaffold_3426 178_002_scaffold_3426 3 1291 bp 52.67 7.67 75.06
NECEvent2014_8_2_scaffold_3427 178_002_scaffold_3427 2 1290 bp 52.25 7.67 75.81
NECEvent2014_8_2_scaffold_2908 178_002_scaffold_2908
Species: Enterobacter sp. YD4 (100%)
1 1603 bp 51.15 7.67 83.09
NECEvent2014_8_2_scaffold_1947 178_002_scaffold_1947
Species: Enterobacter cloacae (50%)
2 2795 bp 50.81 7.67 81.90
NECEvent2014_8_2_scaffold_3514 178_002_scaffold_3514
Species: Enterobacter cloacae (50%)
2 1252 bp 44.65 7.67 45.53
NECEvent2014_8_2_scaffold_2529 178_002_scaffold_2529
Order: Enterobacteriales (100%)
3 1916 bp 49.74 7.67 78.60
NECEvent2014_8_2_scaffold_3214 178_002_scaffold_3214
Genus: Enterobacter (100%)
3 1410 bp 55.53 7.66 91.28
NECEvent2014_8_2_scaffold_2696 178_002_scaffold_2696
Order: Enterobacteriales (100%)
3 1763 bp 52.52 7.66 78.62
NECEvent2014_8_2_scaffold_1758 178_002_scaffold_1758
Genus: Enterobacter (50%)
4 3270 bp 48.75 7.66 67.71
NECEvent2014_8_2_scaffold_4038 178_002_scaffold_4038
Species: Enterobacter sp. R4-368 (100%)
2 1057 bp 39.64 7.66 96.78
NECEvent2014_8_2_scaffold_3343 178_002_scaffold_3343
Species: Cronobacter sakazakii (100%)
1 1331 bp 56.65 7.66 99.85
NECEvent2014_8_2_scaffold_3698 178_002_scaffold_3698
Species: Leclercia adecarboxylata (50%)
2 1177 bp 52.85 7.65 99.15
NECEvent2014_8_2_scaffold_3595 178_002_scaffold_3595
Species: Escherichia coli (50%)
2 1215 bp 45.93 7.65 60.49
NECEvent2014_8_2_scaffold_2060 178_002_scaffold_2060
Genus: Dickeya (75%)
4 2588 bp 48.15 7.65 75.70
NECEvent2014_8_2_scaffold_2182 178_002_scaffold_2182
Genus: Enterobacter (66.67%)
3 2396 bp 56.51 7.64 99.17
NECEvent2014_8_2_scaffold_4085 178_002_scaffold_4085
Species: Citrobacter youngae (50%)
2 1040 bp 53.75 7.64 96.63
NECEvent2014_8_2_scaffold_2925 178_002_scaffold_2925
Order: Enterobacteriales (100%)
3 1592 bp 51.01 7.63 92.53
NECEvent2014_8_2_scaffold_1994 178_002_scaffold_1994
Species: Kosakonia sacchari (100%)
1 2678 bp 55.53 7.62 99.93
NECEvent2014_8_2_scaffold_4019 178_002_scaffold_4019 2 1064 bp 43.61 7.61 36.94
NECEvent2014_8_2_scaffold_4021 178_002_scaffold_4021
Species: Enterobacter sp. 638 (50%)
2 1064 bp 54.98 7.61 84.02
NECEvent2014_8_2_scaffold_2303 178_002_scaffold_2303
Genus: Klebsiella (66.67%)
3 2209 bp 55.14 7.61 92.08
Displaying items 201-250 of 1344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.