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NECEvent2014_8_3_scaffold_1

Alias: 178_003_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 271 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_1_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..335)
DNA (333bp) protein (111aa)
UPI0003D5CF15 related cluster n=1 Tax=unknown RepID=UPI0003D5CF15
Polypeptide composition of the spore coat protein CotJC {ECO:0000313|EMBL:KJZ86350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
manganese containing catalase
NECEvent2014_8_3_scaffold_1_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(339..599)
DNA (261bp) protein (87aa)
Spore coat protein CotJB n=4 Tax=Clostridium butyricum RepID=B1QS58_CLOBU
Polypeptide composition of the spore coat protein CotJB {ECO:0000313|EMBL:KJZ86351.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
cotJB; spore coat composition protein, manganese catalase family
NECEvent2014_8_3_scaffold_1_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(614..781)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ72_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96042.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1062..1601
DNA (540bp) protein (180aa)
Nicotinamidase {ECO:0000313|EMBL:KJZ86358.1}; EC=3.5.1.19 {ECO:0000313|EMBL:KJZ86358.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2V0_CLOBU rbh
amidase
NECEvent2014_8_3_scaffold_1_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1674..2687)
DNA (1014bp) protein (338aa)
Glycosyl transferase n=3 Tax=Clostridium butyricum RepID=B1QS55_CLOBU rbh
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:KJZ86347.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
family 2 glycosyl transferase
NECEvent2014_8_3_scaffold_1_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2702..3610)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN65_CLOBU rbh
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KJZ86348.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
exopolysaccharide biosynthesis protein
NECEvent2014_8_3_scaffold_1_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4082..4786
DNA (705bp) protein (235aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1QS53_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ34193.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
two component transcriptional regulator
NECEvent2014_8_3_scaffold_1_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4761..7088
DNA (2328bp) protein (776aa)
Two-component sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=B1QS52_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86382.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sensor histidine kinase
NECEvent2014_8_3_scaffold_1_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7298..7642
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QS51_CLOBU
No significant y {ECO:0000313|EMBL:KJZ86458.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7758..8924
DNA (1167bp) protein (389aa)
Lysophospholipase L2 {ECO:0000313|EMBL:KJZ93096.1}; EC=3.1.1.5 {ECO:0000313|EMBL:KJZ93096.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
pldB1; lysophospholipase L2 (EC:3.1.1.5)
Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=2 Tax=Clostridium butyricum RepID=B1QS50_CLOBU rbh
NECEvent2014_8_3_scaffold_1_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9159..10379
DNA (1221bp) protein (407aa)
Chloride channel protein EriC n=2 Tax=Clostridium butyricum RepID=B1QS49_CLOBU rbh
Chloride channel protein EriC {ECO:0000313|EMBL:EEP54413.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
chloride ion channel protein
NECEvent2014_8_3_scaffold_1_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10631..14317
DNA (3687bp) protein (1229aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACW4_CLOBU rbh
endo-1,4-beta-galactosidase
NECEvent2014_8_3_scaffold_1_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14515..14979
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ57_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86450.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15136..15369)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2U2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15778..16224
DNA (447bp) protein (149aa)
Heat shock protein, molecular chaperone n=4 Tax=Clostridium butyricum RepID=B1QS45_CLOBU rbh
Heat shock protein, molecular chaperone {ECO:0000313|EMBL:KJZ86400.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
hsp; 18 kDa heat shock protein Hsp
NECEvent2014_8_3_scaffold_1_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16459..17196
DNA (738bp) protein (246aa)
Tetratricopeptide repeat domain protein n=3 Tax=Clostridium butyricum RepID=B1QS44_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96012.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17481..18161
DNA (681bp) protein (227aa)
UPI0003D6253C related cluster n=1 Tax=unknown RepID=UPI0003D6253C rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86385.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18483..19514
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLA6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96009.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19624..20517)
DNA (894bp) protein (298aa)
UPI0003D6842A related cluster n=1 Tax=unknown RepID=UPI0003D6842A rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86340.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator, LysR family
NECEvent2014_8_3_scaffold_1_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20904..21989
DNA (1086bp) protein (362aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJZ86365.1}; EC=1.2.1.11 {ECO:0000313|EMBL:KJZ86365.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
asd2; aspartate-semialdehyde dehydrogenase Asd (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8KEX6_CLOBU rbh
NECEvent2014_8_3_scaffold_1_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22203..22685
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QS39_CLOBU rbh
No significant y {ECO:0000313|EMBL:KJZ86376.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23086..23256
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACU7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34178.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_1_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24003..25292
DNA (1290bp) protein (430aa)
aspS2; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=3 Tax=Clostridium butyricum RepID=B1QS37_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96006.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_3_scaffold_1_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25596..25874
DNA (279bp) protein (93aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=4 Tax=Clostridium butyricum RepID=B1QS36_CLOBU
hypothetical protein
NECEvent2014_8_3_scaffold_1_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25890..27329
DNA (1440bp) protein (480aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=997898
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Clostridium butyricum RepID=M8KEX8_CLOBU rbh
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
NECEvent2014_8_3_scaffold_1_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27342..28781
DNA (1440bp) protein (480aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN37_CLOBU rbh
NECEvent2014_8_3_scaffold_1_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28838..29203)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95191.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_1_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29346..29639)
DNA (294bp) protein (98aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:KJZ86355.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJZ86355.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
Acetolactate synthase isozyme III small subunit n=4 Tax=Clostridium butyricum RepID=B1QS32_CLOBU
amino acid-binding ACT domain protein
NECEvent2014_8_3_scaffold_1_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29632..31365)
DNA (1734bp) protein (578aa)
ilvB2; acetolactate synthase isozyme 1 large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2R3_CLOBU rbh
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ENZ34171.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_8_3_scaffold_1_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32044..33060
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z3G0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34170.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 271 in total

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