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NECEvent2014_8_3_scaffold_2

Alias: 178_003_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_2_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52..498)
DNA (447bp) protein (149aa)
UPF0178 protein HMPREF1084_03799 n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1N8_CLOBU
UPF0178 protein HMPREF1084_03799 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
hypothetical protein DUF188
NECEvent2014_8_3_scaffold_2_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(504..1853)
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase Pgi (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Clostridium butyricum RepID=B1R095_CLOBU rbh
NECEvent2014_8_3_scaffold_2_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2117..3100)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS21_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97275.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_2_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3471..4634)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSJ2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97268.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
FliB domain protein
NECEvent2014_8_3_scaffold_2_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4923..5489)
DNA (567bp) protein (189aa)
UPI0003D68C1C related cluster n=1 Tax=unknown RepID=UPI0003D68C1C rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI91578.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_2_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5731..7272)
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS16_CLOBU rbh
NECEvent2014_8_3_scaffold_2_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7398..8852)
DNA (1455bp) protein (485aa)
guaB; inosine-5'-monophosphate dehydrogenase GuaB (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1Z7_CLOBU rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
NECEvent2014_8_3_scaffold_2_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9262..9687)
DNA (426bp) protein (142aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC98_CLOBU
Type II secretion envelope pseudopilin protein {ECO:0000313|EMBL:KJZ83382.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
putative pilin
NECEvent2014_8_3_scaffold_2_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9836..11464)
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=4 Tax=Clostridium butyricum RepID=B1R088_CLOBU rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=997898 speci
groL; 60 kDa chaperonin
NECEvent2014_8_3_scaffold_2_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11535..11819)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=4 Tax=Clostridium butyricum RepID=B1R087_CLOBU
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1523155 spec
groES; co-chaperonin GroES
NECEvent2014_8_3_scaffold_2_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12151..13665)
DNA (1515bp) protein (505aa)
FeFe-hydrogenase group B3 n=2 Tax=Clostridium butyricum RepID=G4WZX1_CLOBU rbh
FeFe-hydrogenase group B3 {ECO:0000313|EMBL:AEP27859.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
(FeFe) hydrogenase, group B1/B3
NECEvent2014_8_3_scaffold_2_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13834..14148
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSI3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83352.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_2_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14247..15176)
DNA (930bp) protein (310aa)
N-glycosylase/DNA lyase (EC:3.2.2.- 4.2.99.18)
8-oxoguanine DNA glycosylase domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K204_CLOBU rbh
NtrC family Transcriptional regulator, ATPase domain {ECO:0000313|EMBL:KJZ97303.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
NECEvent2014_8_3_scaffold_2_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15536..16384)
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KJZ83391.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KJZ83391.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
hbd1; 3-hydroxybutyryl-CoA dehydrogenase Hbd (EC:1.1.1.157)
Beta-hydroxybutyryl-CoA-dehydrogenase n=4 Tax=Clostridium RepID=B3VSA2_CLOBU rbh
NECEvent2014_8_3_scaffold_2_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16560..17567)
DNA (1008bp) protein (336aa)
Electron transfer flavoprotein, alpha subunit n=2 Tax=Clostridium butyricum RepID=M8JGM5_CLOBU rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:KHD14268.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
fixB2; protein FixB
NECEvent2014_8_3_scaffold_2_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17590..18369)
DNA (780bp) protein (260aa)
Electron transfer flavoprotein, beta subunit n=2 Tax=Clostridium butyricum RepID=M8J6F6_CLOBU rbh
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:KJZ90936.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
electron transfer flavoprotein, alpha/beta-subunit-like protein
NECEvent2014_8_3_scaffold_2_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18383..19522)
DNA (1140bp) protein (380aa)
bcd1; acyl-CoA dehydrogenase, short-chain specific (EC:1.3.8.1)
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSH8_CLOBU rbh
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:ENZ30395.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
NECEvent2014_8_3_scaffold_2_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19600..20385)
DNA (786bp) protein (262aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=4 Tax=Clostridium butyricum RepID=B1R078_CLOBU rbh
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ENZ30394.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.
NECEvent2014_8_3_scaffold_2_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20741..21376)
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=4 Tax=Clostridium butyricum RepID=B1R077_CLOBU rbh
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
rex; redox-sensing transcriptional repressor Rex
NECEvent2014_8_3_scaffold_2_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21625..22194)
DNA (570bp) protein (190aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE26_CLOBU rbh
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
mntP1; putative manganese efflux pump MntP 2
NECEvent2014_8_3_scaffold_2_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22370..24835)
DNA (2466bp) protein (822aa)
Cadmium-transporting ATPase {ECO:0000313|EMBL:KJZ83374.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KJZ83374.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
cadA; cadmium-translocating P-type ATPase (EC:3.6.3.3)
Cadmium-exporting ATPase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6G1_CLOBU rbh
NECEvent2014_8_3_scaffold_2_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24920..25285)
DNA (366bp) protein (122aa)
Cadmium efflux system accessory protein n=3 Tax=Clostridium butyricum RepID=B1R074_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30390.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cadmium efflux system accessory protein
NECEvent2014_8_3_scaffold_2_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25445..26053)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R073_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30389.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_2_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26407..27678)
DNA (1272bp) protein (424aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1R072_CLOBU rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system lactose/cellobiose family transporter subunit IIC
NECEvent2014_8_3_scaffold_2_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27714..28802)
DNA (1089bp) protein (363aa)
Outer surface protein n=3 Tax=Clostridium butyricum RepID=B1R071_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83389.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
outer surface protein
NECEvent2014_8_3_scaffold_2_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28804..29712)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRZ9_CLOBU rbh
N-acetylglucosamine kinase-like protein {ECO:0000313|EMBL:KJZ90922.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
BadF/BadG/BcrA/BcrD type ATPase
NECEvent2014_8_3_scaffold_2_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29745..30044)
DNA (300bp) protein (100aa)
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:EEP55601.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP55601.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Lichenan-specific phosphotransferase enzyme iia component n=3 Tax=Clostridium butyricum RepID=B1R069_CLOBU
PTS system lactose/cellobiose-specific transporter subunit IIA
NECEvent2014_8_3_scaffold_2_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30097..30402)
DNA (306bp) protein (102aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ83403.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ83403.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Lichenan-specific phosphotransferase enzyme iib component n=2 Tax=Clostridium butyricum RepID=B1R068_CLOBU
phosphotransferase system, lactose/cellobiose-specific IIB subunit
NECEvent2014_8_3_scaffold_2_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30599..33358)
DNA (2760bp) protein (920aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1L3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30383.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NtrC family Transcriptional regulator, ATPase domain
NECEvent2014_8_3_scaffold_2_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33426..34553)
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523154 species
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE16_CLOBU rbh
N-acetylglucosamine-6-phosphate deacetylase
Displaying items 1-30 of 166 in total

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