Alias: 178_003_scaffold_4
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
NECEvent2014_8_3_scaffold_4_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
86..1642
|
Mg chelatase-like protein n=4 Tax=Clostridium butyricum RepID=N9Z8D8_CLOBU
rbh
Mg chelatase-like protein {ECO:0000313|EMBL:ENZ36010.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
comM; competence protein ComM
|
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NECEvent2014_8_3_scaffold_4_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1655..2716
|
DNA uptake protein n=4 Tax=Clostridium butyricum RepID=B1QSJ1_CLOBU
rbh
Rossmann fold nucleotide-binding protein Smf {ECO:0000313|EMBL:KJZ83019.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
DNA protecting protein DprA
|
|
NECEvent2014_8_3_scaffold_4_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2761..4854
|
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1523154 species="Bacteria; Firmicute
topA; DNA topoisomerase 1 (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J8S4_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5056..5832
|
GTP-sensing transcriptional pleiotropic repressor CodY n=3 Tax=Clostridium butyricum RepID=C4IJD5_CLOBU
rbh
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
codY; GTP-sensing transcriptional pleiotropic repressor CodY
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NECEvent2014_8_3_scaffold_4_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
6307..7008
|
30S ribosomal protein S2 n=2 Tax=Clostridium butyricum RepID=M8JHS1_CLOBU
rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rpsB; 30S ribosomal protein S2
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|
NECEvent2014_8_3_scaffold_4_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7109..8026
|
Elongation factor Ts n=2 Tax=Clostridium butyricum RepID=M8K4F2_CLOBU
rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostrid
tsf; elongation factor Ts
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NECEvent2014_8_3_scaffold_4_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8262..8975
|
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase PyrH (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Clostridium butyricum RepID=M8KCM3_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
8986..9543
|
Ribosome-recycling factor n=2 Tax=Clostridium butyricum RepID=M8J8R8_CLOBU
rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=997898 species="Bacteria;
frr; ribosome-recycling factor Frr
|
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NECEvent2014_8_3_scaffold_4_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9639..10400
|
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Isoprenyl transferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJ52_CLOBU
rbh
undecaprenyl diphosphate synthase
|
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NECEvent2014_8_3_scaffold_4_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10414..11208
|
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
cdsA; phosphatidate cytidylyltransferase CdsA (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=4 Tax=Clostridium butyricum RepID=B1QUZ1_CLOBU
rbh
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NECEvent2014_8_3_scaffold_4_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11335..12306
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Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QUZ0_CLOBU
rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55049.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
permease
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NECEvent2014_8_3_scaffold_4_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12334..13494
|
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z812_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13512..14525
|
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
RIP metalloprotease RseP n=4 Tax=Clostridium butyricum RepID=B1QUY8_CLOBU
rbh
putative membrane-associated zinc metalloprotease
|
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NECEvent2014_8_3_scaffold_4_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14729..15778
|
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Clostridium butyricum RepID=M8JJ47_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16066..20397
|
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1523154 species="Bacteria; Firmicu
polC; DNA polymerase III PolC (EC:2.7.7.7)
DNA polymerase III polC-type n=2 Tax=Clostridium butyricum RepID=B1QUY6_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
20671..21132
|
Ribosome maturation factor RimP n=4 Tax=Clostridium butyricum RepID=B1QUY5_CLOBU
rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
rimP; ribosome maturation factor RimP
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NECEvent2014_8_3_scaffold_4_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21150..22304
|
Transcription termination factor NusA n=2 Tax=Clostridium butyricum RepID=M8KCL3_CLOBU
rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
nusA; transcription termination/antitermination protein NusA
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NECEvent2014_8_3_scaffold_4_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22320..22586
|
YlxR n=2 Tax=Clostridium butyricum RepID=M8J8Q6_CLOBU
Nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:KJZ83010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
hypothetical protein
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NECEvent2014_8_3_scaffold_4_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
22579..22899
|
Ribosomal protein, L7Ae family n=4 Tax=Clostridium butyricum RepID=B1QUY2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36028.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ribosomal protein L7Ae/L30e/S12e/gadd45
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NECEvent2014_8_3_scaffold_4_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
22915..25008
|
Translation initiation factor IF-2 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHQ2_CLOBU
rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
infB; translation initiation factor IF-2
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NECEvent2014_8_3_scaffold_4_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24969..25082
|
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8K4D6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36030.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
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NECEvent2014_8_3_scaffold_4_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25022..25375
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Ribosome-binding factor A n=3 Tax=Clostridium butyricum RepID=B1QUY0_CLOBU
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rbfA; ribosome-binding factor A
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NECEvent2014_8_3_scaffold_4_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25375..26352
|
nrnA: bifunctional oligoribonuclease and PAP phosphatase NrnA (EC:3.1.-.- 3.1.3.7)
DHH subfamily 1 protein n=4 Tax=Clostridium butyricum RepID=B1QUX9_CLOBU
rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84576.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
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NECEvent2014_8_3_scaffold_4_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26369..27244
|
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
tRNA pseudouridine synthase B n=2 Tax=Clostridium butyricum RepID=M8JJ36_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27260..28195
|
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=997898 species="Bacteria; Firmicutes;
ribC: riboflavin biosynthesis protein RibC (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATE6_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28313..28576
|
30S ribosomal protein S15 n=4 Tax=Clostridium butyricum RepID=B1QUX6_CLOBU
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsO; 30S ribosomal protein S15
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NECEvent2014_8_3_scaffold_4_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28678..30783
|
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=152315
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z825_CLOBU
rbh
|
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NECEvent2014_8_3_scaffold_4_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
30929..32236
|
Peptidase M16 domain protein n=3 Tax=Clostridium butyricum RepID=B1QUX4_CLOBU
rbh
Processing proteinase {ECO:0000313|EMBL:EEP53701.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E
peptidase M16 domain-containing protein
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NECEvent2014_8_3_scaffold_4_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
32448..32729
|
PRC-barrel domain protein n=3 Tax=Clostridium butyricum RepID=B1QUX3_CLOBU
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:ENZ36038.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
sporulation protein, YlmC/YmxH family
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NECEvent2014_8_3_scaffold_4_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
32903..34111
|
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
dapG; aspartokinase 1 (EC:2.7.2.4)
Aspartokinase n=3 Tax=Clostridium butyricum RepID=B1QUX2_CLOBU
rbh
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