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NECEvent2014_8_3_scaffold_5

Alias: 178_003_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_5_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50..679
DNA (630bp) protein (210aa)
Protein with metal dependent protease domain n=3 Tax=Clostridium butyricum RepID=B1QTQ3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35850.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase M50
NECEvent2014_8_3_scaffold_5_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1251..2939
DNA (1689bp) protein (563aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=997898 species="Bacteria; Firm
argS; arginine--tRNA ligase ArgS (EC:6.1.1.19)
Arginine--tRNA ligase n=3 Tax=Clostridium butyricum RepID=B1QTQ2_CLOBU rbh
NECEvent2014_8_3_scaffold_5_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3136..4260
DNA (1125bp) protein (375aa)
Permease n=4 Tax=Clostridium butyricum RepID=B1QTQ1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83059.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
permease rbh
NECEvent2014_8_3_scaffold_5_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4412..5140
DNA (729bp) protein (243aa)
HAD-superfamily subfamily IB hydrolase n=4 Tax=Clostridium butyricum RepID=B1QTQ0_CLOBU rbh
HAD hydrolase, family IB {ECO:0000313|EMBL:ENZ35853.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD-superfamily subfamily IB hydrolase
NECEvent2014_8_3_scaffold_5_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5155..5970
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KC46_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35854.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein rbh
NECEvent2014_8_3_scaffold_5_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6188..7645)
DNA (1458bp) protein (486aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1523154 species="Bacteria; F
gltX; glutamate--tRNA ligase GltX (EC:6.1.1.17)
Glutamate--tRNA ligase n=3 Tax=Clostridium butyricum RepID=C4IHU6_CLOBU rbh
NECEvent2014_8_3_scaffold_5_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7896..8789)
DNA (894bp) protein (298aa)
ComE operon protein 3 n=2 Tax=Clostridium butyricum RepID=C4IHU5_CLOBU rbh
ComE operon protein 3 {ECO:0000313|EMBL:EEP55048.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E
comEC1; ComE operon protein 3
NECEvent2014_8_3_scaffold_5_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9177..10937
DNA (1761bp) protein (587aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R0J4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35857.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_5_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10979..11734)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHL5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35858.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_8_3_scaffold_5_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11910..12098)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASX2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35859.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_5_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12242..12709)
DNA (468bp) protein (156aa)
Transcriptional regulator, AsnC family n=4 Tax=Clostridium butyricum RepID=B1R0J6_CLOBU rbh
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ETI91141.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
AsnC family transcriptional regulator
NECEvent2014_8_3_scaffold_5_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12946..13275
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K431_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83035.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_5_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13319..14326)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KC97_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83024.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_5_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14485..14985
DNA (501bp) protein (167aa)
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily n=4 Tax=Clostridium butyricum RepID=B1R0J9_CLOBU rbh
Carbonic anhydrase, family 3 {ECO:0000313|EMBL:KJZ83064.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
carbonic anhydrase
NECEvent2014_8_3_scaffold_5_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15026..15862
DNA (837bp) protein (279aa)
RNA binding S1 domain protein n=2 Tax=Clostridium butyricum RepID=M8JIT7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83056.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA-binding S1 domain-containing protein
NECEvent2014_8_3_scaffold_5_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15972..17195
DNA (1224bp) protein (408aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R0K1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55024.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_3_scaffold_5_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17243..18667)
DNA (1425bp) protein (475aa)
Stage V sporulation protein AF n=4 Tax=Clostridium butyricum RepID=B1R0K2_CLOBU rbh
Stage V sporulation protein AF (SpoVAF) {ECO:0000313|EMBL:KJZ83023.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
spoVAF; stage V sporulation protein AF
NECEvent2014_8_3_scaffold_5_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18944..20791
DNA (1848bp) protein (616aa)
Asparagine synthetase glutamine-hydrolyzing {ECO:0000313|EMBL:KJZ83034.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KJZ83034.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
asnO; asparagine synthetase (EC:6.3.5.4)
Asparagine synthetase n=2 Tax=Clostridium butyricum RepID=M8KC92_CLOBU rbh
NECEvent2014_8_3_scaffold_5_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20869..21171)
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0K4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53634.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_3_scaffold_5_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21448..25098
DNA (3651bp) protein (1217aa)
Subtilase family protein {ECO:0000313|EMBL:KJZ83045.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJZ83045.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASY3_CLOBU rbh
subtilisin like protease
NECEvent2014_8_3_scaffold_5_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25185..25604
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0K6_CLOBU
DUF327 domain-containing protein {ECO:0000313|EMBL:KJZ83098.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_8_3_scaffold_5_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25855..26853
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7L3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35871.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
NECEvent2014_8_3_scaffold_5_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26828..27592
DNA (765bp) protein (255aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KC88_CLOBU rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:KJZ83085.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
NECEvent2014_8_3_scaffold_5_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27576..28244
DNA (669bp) protein (223aa)
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000313|EMBL:EEP53496.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEP53496.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 2 (EC:3.6.3.-)
Aliphatic sulfonates import ATP-binding protein SsuB n=2 Tax=Clostridium butyricum RepID=B1R0K9_CLOBU rbh
NECEvent2014_8_3_scaffold_5_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28297..28533
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=UPI00035F48E2
NECEvent2014_8_3_scaffold_5_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28646..30352
DNA (1707bp) protein (569aa)
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z827_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35875.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_5_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30476..30871
DNA (396bp) protein (132aa)
Thioredoxin n=2 Tax=Clostridium butyricum RepID=M8K416_CLOBU
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
thioredoxin
NECEvent2014_8_3_scaffold_5_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30933..31961)
DNA (1029bp) protein (343aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KJZ83032.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KJZ83032.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
ilvE2; branched-chain-amino-acid aminotransferase IlvE (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=2 Tax=Clostridium butyricum RepID=M8KC85_CLOBU rbh
NECEvent2014_8_3_scaffold_5_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32320..34218)
DNA (1899bp) protein (633aa)
nadE; glutamine-dependent NAD(+) synthetase NadE (EC:6.3.5.1)
Glutamine-dependent NAD(+) synthetase n=2 Tax=Clostridium butyricum RepID=M8J8B6_CLOBU rbh
NAD+ synthetase {ECO:0000313|EMBL:ENZ35878.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_5_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34736..35167
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASZ4_CLOBU
Putative activity regulator of membrane protease YbbK {ECO:0000313|EMBL:KJZ83110.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
hypothetical protein
Displaying items 1-30 of 99 in total

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