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NECEvent2014_8_3_scaffold_21

Alias: 178_003_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_21_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

186..986
DNA (801bp) protein (267aa)
UPF0246 protein HMPREF1084_00782 n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIP9_CLOBU rbh
UPF0246 protein HMPREF1084_00782 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
hypothetical protein
NECEvent2014_8_3_scaffold_21_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1027..1938
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU04_CLOBU rbh
NECEvent2014_8_3_scaffold_21_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2034..2480
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSW8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53846.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_3_scaffold_21_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2752..3309
DNA (558bp) protein (186aa)
UPF0397 protein CBDKU1_17390 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIB4_CLOBU rbh
UPF0397 protein ClosIBUN125C_CONTIG71g03956 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_8_3_scaffold_21_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3506..5209
DNA (1704bp) protein (568aa)
putative ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K4Y2_CLOBU rbh
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter {ECO:0000313|EMBL:KJZ83463.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
NECEvent2014_8_3_scaffold_21_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5209..6039
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIQ2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83725.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cobalt transport protein family protein
NECEvent2014_8_3_scaffold_21_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6296..7687
DNA (1392bp) protein (464aa)
Membrane associated methyl-accepting chemotaxis protein n=3 Tax=Clostridium butyricum RepID=B1QSX2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83710.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
methyl-accepting chemotaxis protein
NECEvent2014_8_3_scaffold_21_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7783..9759
DNA (1977bp) protein (659aa)
GTP-binding elongation factor, TetM/TetO family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJN6_CLOBU rbh
Ribosome protection-type tetracycline resistance-like protein, group 2 {ECO:0000313|EMBL:KJZ83456.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
tetP; tetracycline resistance protein TetP
NECEvent2014_8_3_scaffold_21_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9867..10445)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Q9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83545.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_21_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10662..11108
DNA (447bp) protein (149aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=M8K4X8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83524.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
acetyltransferase, gnat family
NECEvent2014_8_3_scaffold_21_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11153..12691
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIQ7_CLOBU rbh
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:KJZ83475.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
two component transcriptional regulator, AraC family
NECEvent2014_8_3_scaffold_21_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12744..14399
DNA (1656bp) protein (552aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AU11_CLOBU rbh
NECEvent2014_8_3_scaffold_21_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14650..15936
DNA (1287bp) protein (429aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z901_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83719.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
maltose/maltodextrin transport system substrate-binding protein
NECEvent2014_8_3_scaffold_21_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15991..17385
DNA (1395bp) protein (465aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Sugar ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8JIA5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83479.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_3_scaffold_21_15

Not on your lists

17385..18236
DNA (852bp) protein (284aa)
Sugar ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8K4X2_CLOBU rbh
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:ETJ36005.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
maltose/maltodextrin transport system permease
NECEvent2014_8_3_scaffold_21_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18310..20001
DNA (1692bp) protein (564aa)
Bacterial extracellular solute-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KD55_CLOBU rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:KJZ83473.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_8_3_scaffold_21_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20203..22185
DNA (1983bp) protein (661aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J996_CLOBU rbh
Glycogen debranching enzyme-like protein {ECO:0000313|EMBL:KJZ83468.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. I
glycogen debranching protein
NECEvent2014_8_3_scaffold_21_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22187..24157
DNA (1971bp) protein (657aa)
Pullulanase, type I n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJM5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83713.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
pullulanase, type I
NECEvent2014_8_3_scaffold_21_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24286..25020
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIA0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53362.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_3_scaffold_21_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25128..25964)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K4W6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83543.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein DUF1189
NECEvent2014_8_3_scaffold_21_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26463..26888
DNA (426bp) protein (142aa)
6-carboxytetrahydropterin synthase {ECO:0000313|EMBL:KJZ83504.1}; EC=4.1.2.50 {ECO:0000313|EMBL:KJZ83504.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase QueD (EC:4.1.2.50)
6-pyruvoyl tetrahydropterin synthase/QueD family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KD49_CLOBU
NECEvent2014_8_3_scaffold_21_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27010..27678
DNA (669bp) protein (223aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J991_CLOBU rbh
radical SAM domain-containing protein
NECEvent2014_8_3_scaffold_21_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27996..28592
DNA (597bp) protein (199aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase 1 (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJL9_CLOBU rbh
NECEvent2014_8_3_scaffold_21_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29008..29664
DNA (657bp) protein (219aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
queC; 7-cyano-7-deazaguanine synthase (EC:6.3.4.20)
7-cyano-7-deazaguanine synthase n=3 Tax=Clostridium butyricum RepID=B1QSY8_CLOBU rbh
NECEvent2014_8_3_scaffold_21_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29803..30306
DNA (504bp) protein (168aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=4 Tax=Clostridium butyricum RepID=B1QSY9_CLOBU rbh
7-cyano-7-deazaguanine reductase
NECEvent2014_8_3_scaffold_21_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30397..31011)
DNA (615bp) protein (205aa)
Putative sporulation protein YtaF n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KD42_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36223.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_21_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31060..31167
DNA (108bp) protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI90670.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_8_3_scaffold_21_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31355..31801
DNA (447bp) protein (149aa)
Putative transcriptional regulator, MarR/EmrR family n=3 Tax=Clostridium butyricum RepID=C4IIS0_CLOBU rbh
Putative transcriptional regulator, MarR/EmrR family {ECO:0000313|EMBL:EEP53268.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
MarR family transcriptional regulator
NECEvent2014_8_3_scaffold_21_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31923..33656
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z912_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87964.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative ABC transporter permease/ATP-binding protein
NECEvent2014_8_3_scaffold_21_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33649..35487
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8S0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36226.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative ABC transporter permease/ATP-binding protein
Displaying items 1-30 of 71 in total

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