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NECEvent2014_8_3_scaffold_28

Alias: 178_003_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_28_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135..794)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDJ2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91673.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_3_scaffold_28_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1014..2279
DNA (1266bp) protein (422aa)
Iron-sulfur cluster-binding protein n=2 Tax=Clostridium butyricum RepID=M8K5A5_CLOBU rbh
Ferredoxin {ECO:0000313|EMBL:KJZ83973.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
(Fe-S)-binding protein
NECEvent2014_8_3_scaffold_28_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2554..3234
DNA (681bp) protein (227aa)
Permease n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIP5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96796.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
permease
NECEvent2014_8_3_scaffold_28_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3259..4188
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z995_CLOBU rbh
Membrane protein {ECO:0000313|EMBL:KJZ89258.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
permease
NECEvent2014_8_3_scaffold_28_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4239..4880
DNA (642bp) protein (214aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {
pcp; Pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUA5_CLOBU rbh
NECEvent2014_8_3_scaffold_28_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4920..5372
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDJ6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96798.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_28_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5518..6000)
DNA (483bp) protein (161aa)
Flavodoxin n=2 Tax=Clostridium butyricum RepID=M8K5A9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36337.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
flavodoxin
NECEvent2014_8_3_scaffold_28_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6235..6837)
DNA (603bp) protein (201aa)
Uridine kinase {ECO:0000313|EMBL:KJZ89242.1}; EC=2.7.1.48 {ECO:0000313|EMBL:KJZ89242.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Z8_CLOBU rbh
uridine kinase
NECEvent2014_8_3_scaffold_28_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6827..7375)
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R275_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36335.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_28_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7568..11416)
DNA (3849bp) protein (1283aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J9N3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36334.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase
NECEvent2014_8_3_scaffold_28_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11537..12775)
DNA (1239bp) protein (413aa)
thermostable carboxypeptidase 2 (EC:3.4.17.-)
Amidohydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIY7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96804.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_3_scaffold_28_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12974..15067)
DNA (2094bp) protein (698aa)
Glutamine synthetase type III, GlnN {ECO:0000313|EMBL:KJZ89225.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KJZ89225.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
glnA2; glutamine synthetase GlnA (EC:6.3.1.2)
Glutamine synthetase, catalytic region n=3 Tax=Clostridium butyricum RepID=B1R273_CLOBU rbh
NECEvent2014_8_3_scaffold_28_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15561..16541)
DNA (981bp) protein (327aa)
Alpha/beta hydrolase n=2 Tax=Clostridium butyricum RepID=M8JIQ5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36331.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
alpha/beta hydrolase
NECEvent2014_8_3_scaffold_28_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16756..17850)
DNA (1095bp) protein (365aa)
SEC-C motif domain protein n=4 Tax=Clostridium butyricum RepID=M8JK32_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36329.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SEC-C motif domain-containing protein
NECEvent2014_8_3_scaffold_28_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18049..18663)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIY3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36328.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_28_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19135..20244)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWA9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36327.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative alcohol dehydrogenase
NECEvent2014_8_3_scaffold_28_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20616..21404)
DNA (789bp) protein (263aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK36_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97787.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
AraC family transcriptional regulator
NECEvent2014_8_3_scaffold_28_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21394..23115)
DNA (1722bp) protein (574aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
UPI0003D5CF7C related cluster n=1 Tax=unknown RepID=UPI0003D5CF7C rbh
signal transduction histidine kinase LytS
NECEvent2014_8_3_scaffold_28_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23448..25112)
DNA (1665bp) protein (555aa)
Fe3+ ABC transporter permease n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU90_CLOBU rbh
Ferric iron ABC transporter, permease protein {ECO:0000313|EMBL:KJZ88396.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ABC transporter permease
NECEvent2014_8_3_scaffold_28_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25116..26210)
DNA (1095bp) protein (365aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+) ions import ATP-binding protein FbpC n=2 Tax=Clostridium butyricum RepID=M8K5C2_CLOBU rbh
NECEvent2014_8_3_scaffold_28_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26430..27461)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWA3_CLOBU rbh
Ferric iron ABC transporter, iron-binding protein {ECO:0000313|EMBL:KJZ88402.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
putative iron ABC transporter periplasmic iron-binding protein
NECEvent2014_8_3_scaffold_28_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27699..28847)
DNA (1149bp) protein (383aa)
UPI0003D5A248 related cluster n=1 Tax=unknown RepID=UPI0003D5A248 rbh
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ETI90576.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
hypothetical protein
NECEvent2014_8_3_scaffold_28_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29231..29770)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z979_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36320.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_28_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29783..30868)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDL1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97784.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_28_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31106..32587)
DNA (1482bp) protein (494aa)
Replicative DNA helicase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIX5_CLOBU rbh
Replicative DNA helicase {ECO:0000313|EMBL:ENZ36318.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
replicative DNA helicase
NECEvent2014_8_3_scaffold_28_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32589..33647)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIR7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88409.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
replication initiator A domain-containing protein
NECEvent2014_8_3_scaffold_28_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33847..34953)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JK44_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36316.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_28_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35146..36918)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R259_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53148.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_3_scaffold_28_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37125..37628)
DNA (504bp) protein (168aa)
UPI0003D645C7 related cluster n=1 Tax=unknown RepID=UPI0003D645C7 rbh
YbhB YbcL family protein {ECO:0000313|EMBL:ETI90587.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Raf kinase inhibitor-like protein, YbhB/YbcL family
NECEvent2014_8_3_scaffold_28_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37710..38075)
DNA (366bp) protein (122aa)
UPI0003D68214 related cluster n=1 Tax=unknown RepID=UPI0003D68214
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ETI90588.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
transcriptional regulator, HxlR family
Displaying items 1-30 of 48 in total

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