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NECEvent2014_8_3_scaffold_146

Alias: 178_003_scaffold_146

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_146_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

524..1510
DNA (987bp) protein (329aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKK6_CLOBU rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
xerC; site-specific tyrosine recombinase XerC
NECEvent2014_8_3_scaffold_146_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1572..2132)
DNA (561bp) protein (187aa)
Putative liporotein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJ85_CLOBU rbh
Putative liporotein {ECO:0000313|EMBL:EEP53847.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL
putative lipoprotein
NECEvent2014_8_3_scaffold_146_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2281..2703)
DNA (423bp) protein (141aa)
Conserved protein containing Zn-finger domain n=4 Tax=Clostridium butyricum RepID=B1R0F0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36486.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_3_scaffold_146_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2892..3497
DNA (606bp) protein (202aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1403941 species="Bacteria; Firmic
LexA repressor n=4 Tax=Clostridium butyricum RepID=B1R0E9_CLOBU rbh
LexA repressor
NECEvent2014_8_3_scaffold_146_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3615..4901)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJC9_CLOBU rbh
Aluminum resistance protein {ECO:0000313|EMBL:KJZ86884.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aluminum resistance family protein
NECEvent2014_8_3_scaffold_146_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5049..6713)
DNA (1665bp) protein (555aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:KJZ86881.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJZ86881.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
alsS1; acetolactate synthase AlsS (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Clostridium butyricum RepID=M8JKK1_CLOBU rbh
NECEvent2014_8_3_scaffold_146_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6937..7167)
DNA (231bp) protein (77aa)
UPI0003A1C32A related cluster n=1 Tax=unknown RepID=UPI0003A1C32A
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
hfq; RNA-binding protein Hfq
NECEvent2014_8_3_scaffold_146_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7212..8141)
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_0018
miaA; tRNA dimethylallyltransferase MiaA (EC:2.5.1.75)
UPI0003D682D0 related cluster n=1 Tax=unknown RepID=UPI0003D682D0 rbh
NECEvent2014_8_3_scaffold_146_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8194..10254)
DNA (2061bp) protein (687aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWR5_CLOBU rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
mutL; DNA mismatch repair protein MutL
NECEvent2014_8_3_scaffold_146_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10489..11934)
DNA (1446bp) protein (482aa)
CspC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JA60_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36493.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cell wall binding repeat-containing protein
NECEvent2014_8_3_scaffold_146_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12097..12549)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUQ5_CLOBU rbh
Acetyltransferase {ECO:0000313|EMBL:KJZ86895.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-related N-acetyltransferase
NECEvent2014_8_3_scaffold_146_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12822..13496
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9N0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36495.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidoglycan-binding lysin domain protein
NECEvent2014_8_3_scaffold_146_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13563..14885)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9E7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36496.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
xanthine/uracil permease family protein
NECEvent2014_8_3_scaffold_146_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15105..15332)
DNA (228bp) protein (76aa)
Uroporphyrinogen decarboxylase n=2 Tax=Clostridium butyricum RepID=M8KE26_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91302.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_146_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15408..15680)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJE1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36498.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_146_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15801..18671)
DNA (2871bp) protein (957aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUR0_CLOBU rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
mutS; DNA mismatch repair protein MutS
NECEvent2014_8_3_scaffold_146_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19142..19516
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXI9_CLOBU
GTPases-Sulfate adenylate transferase subunit 1 {ECO:0000313|EMBL:KJZ86905.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_8_3_scaffold_146_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19643..20017)
DNA (375bp) protein (125aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
panD; aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QXI8_CLOBU
NECEvent2014_8_3_scaffold_146_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20072..20914)
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
Pantothenate synthetase n=2 Tax=Clostridium butyricum RepID=M8KE21_CLOBU rbh
panC; pantoate--beta-alanine ligase
NECEvent2014_8_3_scaffold_146_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21002..21829)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Clostridium butyricum RepID=M8JA51_CLOBU rbh
NECEvent2014_8_3_scaffold_146_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21829..22791)
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AUR5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86887.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_146_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23027..24271)
DNA (1245bp) protein (415aa)
Efflux ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8JJ64_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36505.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type transport system, involved in lipoprotein release, permease component
NECEvent2014_8_3_scaffold_146_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24262..24996)
DNA (735bp) protein (245aa)
yknY1; ABC transporter ATP-binding protein YknY (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K5S8_CLOBU rbh
Cell division transporter, ATP-binding protein FtsE {ECO:0000313|EMBL:KJZ86892.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_8_3_scaffold_146_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24989..26431)
DNA (1443bp) protein (481aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KE15_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86882.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
multidrug resistance efflux pump
NECEvent2014_8_3_scaffold_146_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26709..27587)
DNA (879bp) protein (293aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridium butyricum RepID=C4IG50_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86891.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
integrase/recombinase
NECEvent2014_8_3_scaffold_146_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28297..29937)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUS0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94436.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
sensory box histidine kinase
NECEvent2014_8_3_scaffold_146_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30326..31711)
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9P5_CLOBU rbh
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ86877.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
Na+-driven multidrug efflux pump
NECEvent2014_8_3_scaffold_146_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32558..32863)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K5S2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86898.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_3_scaffold_146_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33232..33882)
DNA (651bp) protein (217aa)
Nitrite/sulfite reductase 4Fe-4S family protein n=2 Tax=Clostridium butyricum RepID=M8KE11_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92079.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nitrite reductase
NECEvent2014_8_3_scaffold_146_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33869..33994)
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JA40_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36513.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying 30 items

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