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NECEvent2014_8_3_scaffold_186

Alias: 178_003_scaffold_186

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_186_1
unknown

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1..66
DNA (66bp) protein (22aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_186_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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201..1532
DNA (1332bp) protein (444aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
glnA1; glutamine synthetase GlnA (EC:6.3.1.2)
Glutamine synthetase n=3 Tax=Clostridium butyricum RepID=B1QYX5_CLOBU rbh
NECEvent2014_8_3_scaffold_186_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1571..2131
DNA (561bp) protein (187aa)
Nitrogen regulator n=4 Tax=Clostridium butyricum RepID=B1QYX6_CLOBU rbh
Ethanolamine two-component response regulator {ECO:0000313|EMBL:KJZ83276.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
nitR; nitrogen assimilation antiterminator protein NitR
NECEvent2014_8_3_scaffold_186_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2404..6984
DNA (4581bp) protein (1527aa)
Glutamate synthase, NADPH, large subunit {ECO:0000313|EMBL:EEP54279.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEP54279.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
gltB1; ferredoxin-dependent glutamate synthase 1 (EC:1.4.7.1)
Glutamate synthase [NADPH] large chain n=2 Tax=Clostridium butyricum RepID=B1QYX7_CLOBU rbh
NECEvent2014_8_3_scaffold_186_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6999..8471
DNA (1473bp) protein (491aa)
Glutamate synthase NADPH small chain {ECO:0000313|EMBL:KJZ83303.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KJZ83303.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Glutamate synthase, NADH/NADPH, small subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7U5_CLOBU rbh
glutamate synthase, NADH/NADPH, small subunit
NECEvent2014_8_3_scaffold_186_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8584..9996)
DNA (1413bp) protein (471aa)
mannan endo-1,4-beta-mannosidase (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) (EC:3.2.1.78)
Mannan endo-1,4-beta-mannosidase (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) n=2 Tax=Clostridium butyricum RepID=C4IH24_CLOBU rbh
Beta-1,4-mannanase {ECO:0000313|EMBL:KJZ83188.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_3_scaffold_186_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10510..10797
DNA (288bp) protein (96aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QVT6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83274.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_186_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10806..10937
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3Q1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54958.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
NECEvent2014_8_3_scaffold_186_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10959..11837
DNA (879bp) protein (293aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium butyricum RepID=M8KBY7_CLOBU rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ83238.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
LysR family transcriptional regulator
NECEvent2014_8_3_scaffold_186_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12124..13131
DNA (1008bp) protein (336aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=M8J819_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35769.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_8_3_scaffold_186_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13284..14492
DNA (1209bp) protein (403aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7U9_CLOBU rbh
NECEvent2014_8_3_scaffold_186_trna_1
unknown

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14716..14787
DNA (72bp)
transferRNA
NECEvent2014_8_3_scaffold_186_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15060..15515
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QVT1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_3_scaffold_186_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15648..16874)
DNA (1227bp) protein (409aa)
Aminopeptidase S (Leu, Val, Phe, Tyr preference) {ECO:0000313|EMBL:KJZ83190.1}; EC=3.4.11.24 {ECO:0000313|EMBL:KJZ83190.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ampS; aminopeptidase AmpS (EC:3.4.11.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUT7_CLOBU rbh
NECEvent2014_8_3_scaffold_186_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17082..19952
DNA (2871bp) protein (957aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=2 Tax=Clostridium butyricum RepID=R0AHE8_CLOBU rbh
DNA polymerase I {ECO:0000313|EMBL:ENZ35778.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_3_scaffold_186_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20090..20689
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1523156 species="Bacteria; F
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
Dephospho-CoA kinase n=3 Tax=Clostridium butyricum RepID=B1QVS8_CLOBU rbh
NECEvent2014_8_3_scaffold_186_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20704..21327
DNA (624bp) protein (208aa)
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:KJZ96932.1}; EC=3.2.1.- {ECO:0000313|EMBL:KJZ96932.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Secreted protein n=4 Tax=Clostridium butyricum RepID=B1QVS7_CLOBU rbh
soluble lytic murein transglycosylase
NECEvent2014_8_3_scaffold_186_trna_2
unknown

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21446..21528
DNA (83bp)
transferRNA
NECEvent2014_8_3_scaffold_186_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21789..22343
DNA (555bp) protein (185aa)
UPI0003D61B2D related cluster n=1 Tax=unknown RepID=UPI0003D61B2D rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88529.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_186_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22337..22801
DNA (465bp) protein (155aa)
UPI0003D5BD02 related cluster n=1 Tax=unknown RepID=UPI0003D5BD02
Uncharacterized protein {ECO:0000313|EMBL:ETI88530.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_186_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22788..23414
DNA (627bp) protein (209aa)
UPI0003A903A2 related cluster n=1 Tax=unknown RepID=UPI0003A903A2 rbh
Accessory regulator B superfamily protein {ECO:0000313|EMBL:ETI88531.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
accessory gene regulator B superfamily
NECEvent2014_8_3_scaffold_186_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23448..23573
DNA (126bp) protein (42aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QVS3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI88532.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_186_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23689..25377
DNA (1689bp) protein (563aa)
UPI0003D5C475 related cluster n=1 Tax=unknown RepID=UPI0003D5C475 rbh
Ggdef/hd protein {ECO:0000313|EMBL:ETI88533.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ggdef/hd domain protein
NECEvent2014_8_3_scaffold_186_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25673..26266
DNA (594bp) protein (198aa)
UPI0003A11B1B related cluster n=1 Tax=unknown RepID=UPI0003A11B1B rbh
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ETI88534.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
anthranilate synthase component II
NECEvent2014_8_3_scaffold_186_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26259..27611
DNA (1353bp) protein (451aa)
Aminodeoxychorismate synthase, component I n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3P1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96995.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_186_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27623..28348
DNA (726bp) protein (242aa)
Putative branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:EEP54000.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EEP54000.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
Putative branched-chain-amino-acid aminotransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBX6_CLOBU rbh
hypothetical protein
NECEvent2014_8_3_scaffold_186_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28480..29202
DNA (723bp) protein (241aa)
Cell wall binding repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QVR8_CLOBU rbh
Putative cell wall binding repeat-containing protein {ECO:0000313|EMBL:EEP54605.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
cell wall binding domain-containing protein
Displaying 27 items

View Taxonomy