ggKbase home page

NECEvent2014_8_3_scaffold_293_3

Organism: NECEvent2014_8_3_Clostridium_butyricum_28_57

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 2516..4051

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=997898 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 511.0
  • Bit_score: 990
  • Evalue 6.80e-286
rho; transcription termination factor Rho (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 508.0
  • Bit_score: 779
  • Evalue 6.30e-223
Transcription termination factor Rho n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A462_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 511.0
  • Bit_score: 992
  • Evalue 2.20e-286
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1536
TTGATTAAACAAGATTATGAAAGCATGACCTTAAGCAAATTAAAGGAAATTGCAAAAGAATTAGAAATTAAGAATATATCAAAATATAAGAAAAATGAACTGATAGAAGAAATAATAAGTGTTTCTCCAAATTCAATAAAAAAAGATGGAGTAATTCTTAGAGAAAATATTTCTCCAAAAGCAGTTGAAAAAATACAAAGATCAGATTTAGAAATGAAAAATTCAAGCAGTAATTCAGAAAATTCAAAGATACATACTGGTGAAGATAAAAGAGAAACTAGTAATATAAAAGATAGAAATTTCGAAAAGAACGTAAAAAGAGATTACAGCGAAAATCAAAATGTAAATAGTAATAGAAATGATGATTCTCAAAATGAAAAAAAAGAAGTATTAAGAGAAATGATAAATGAATCTAATAGTGCTAAAGGTATATTGGAAATACTGGAAAATAATAATTTTGGATTTTTAAGATGCAAAAATTATTTAACAAGCAGTGAAGATATATATGTATCGCCATCACAAATTAGAAGATTTAATTTGAGAACAGGTGATGAAGTTGAAGGTAAAATAAGAGAAGCCAAAGAAAGCGAAAAGTTTAAAGCGTTATTATTTGTTCAGAAAGTTAATGGTGAAGCACCTGAAAAGGCGATAGGAAGAAAATCTTTTGAAACATTAACTCCAATATATCCAACGGAAAGATTAAAACTTGAGACACAAAACAGTGGAGACCTTTCATCTAGACTGATGGATATAATATGCCCATTAGGAAAAGGTCAAAGAGGTGTTATTGTAGCTCCGCCTAAGGCTGGAAAGACTACTTTATTAAAAAAAGTAGCACAAAACATTGTTAAAAATTATCCGGATATAAAGCTTATAGTTCTTCTTATAGATGAAAGACCAGAAGAAGTTACAGATATGATTAGATCTATAAATGGAGATGTAGTTTATTCAACATTTGATGAAGAACCACAAAATCATGCTAAGGTTTCTCAAATGGTTTTAGAAAGAGCCAAAAGAATGGTTGAGCAAGGAAAAGATGTAGTTATACTTATGGATAGTATAACTAGATTATCTAGAGCTTACAACTTAACGATAACACCAACAGGAAGAACTTTATCAGGAGGTCTTGATCCTGGAGCGTTAATAATGCCAAAGAAATTTTTTGGTGCAGCAAGAAATATTGAAGAAGGTGGAAGTCTTACAATTTTAGCTACAGCACTTGTTGAAACAGGTTCAAGAATGGATGATATGATTTTTGAGGAATTTAAAGGAACAGGAAATATGGAAGTTCATCTTGATAGAAGACTTCAAGAAAGAAGAATTTTCCCAGCAATTGATGTATATAAATCAGGTACTAGAAAAGAAGATTTATTATTATCTAAAGAGGAACTTGAAGTAGCATTTTCAATTAGAAAAATTATGTATAAGGATGGAAATGCAGATGATGTTACTGAAAATCTTATAAATATGCTTTCAAAAACTAAAAATAACGAAGAGTTTATTGAAACTTTTAAGAAAAACAATTTTAAGAAATAA
PROTEIN sequence
Length: 512
LIKQDYESMTLSKLKEIAKELEIKNISKYKKNELIEEIISVSPNSIKKDGVILRENISPKAVEKIQRSDLEMKNSSSNSENSKIHTGEDKRETSNIKDRNFEKNVKRDYSENQNVNSNRNDDSQNEKKEVLREMINESNSAKGILEILENNNFGFLRCKNYLTSSEDIYVSPSQIRRFNLRTGDEVEGKIREAKESEKFKALLFVQKVNGEAPEKAIGRKSFETLTPIYPTERLKLETQNSGDLSSRLMDIICPLGKGQRGVIVAPPKAGKTTLLKKVAQNIVKNYPDIKLIVLLIDERPEEVTDMIRSINGDVVYSTFDEEPQNHAKVSQMVLERAKRMVEQGKDVVILMDSITRLSRAYNLTITPTGRTLSGGLDPGALIMPKKFFGAARNIEEGGSLTILATALVETGSRMDDMIFEEFKGTGNMEVHLDRRLQERRIFPAIDVYKSGTRKEDLLLSKEELEVAFSIRKIMYKDGNADDVTENLINMLSKTKNNEEFIETFKKNNFKK*