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NECEvent2014_8_3_scaffold_293

Alias: 178_003_scaffold_293

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_293_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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132..443
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2H2_CLOBU
Anti-sigma factor {ECO:0000313|EMBL:KJZ85523.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_293_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

626..2233
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthase PyrG (EC:6.3.4.2)
CTP synthase n=4 Tax=Clostridium butyricum RepID=B1R2H3_CLOBU rbh
NECEvent2014_8_3_scaffold_293_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2516..4051
DNA (1536bp) protein (512aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=997898 specie
rho; transcription termination factor Rho (EC:3.6.4.-)
Transcription termination factor Rho n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A462_CLOBU rbh
NECEvent2014_8_3_scaffold_293_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4087..5208)
DNA (1122bp) protein (374aa)
ugtP; processive diacylglycerol glucosyltransferase UgtP (EC:2.4.1.-)
Monogalactosyldiacylglycerol synthase n=3 Tax=Clostridium butyricum RepID=C4IEE5_CLOBU rbh
Monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EEP55681.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
NECEvent2014_8_3_scaffold_293_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5401..5610)
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=4 Tax=Clostridium butyricum RepID=B1R2H6_CLOBU
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rpmE; 50S ribosomal protein L31
NECEvent2014_8_3_scaffold_293_6

Not on your lists

6013..6600
DNA (588bp) protein (196aa)
tdk; thymidine kinase Tdk (EC:2.7.1.21)
Thymidine kinase n=4 Tax=Clostridium butyricum RepID=B1R2H7_CLOBU rbh
Thymidine kinase {ECO:0000313|EMBL:ETJ16452.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_8_3_scaffold_293_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6622..8379
DNA (1758bp) protein (586aa)
Modification methylase, HemK family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAH3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85485.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
prmC; release factor glutamine methyltransferase PrmC
NECEvent2014_8_3_scaffold_293_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8614..9696
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=4 Tax=Clostridium butyricum RepID=B1R2H9_CLOBU rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
prfA; peptide chain release factor 1
NECEvent2014_8_3_scaffold_293_9

Not on your lists

9766..10398
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2I0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ16455.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_8_3_scaffold_293_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10417..11466
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=4 Tax=Clostridium butyricum RepID=B1R2I1_CLOBU rbh
ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
NECEvent2014_8_3_scaffold_293_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11487..11936
DNA (450bp) protein (150aa)
ywlF1; putative sugar phosphate isomerase YwlF (EC:5.3.1.-)
Ribose 5-phosphate isomerase B n=4 Tax=Clostridium butyricum RepID=B1R2I2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85521.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_3_scaffold_293_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12075..12704
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
Uracil phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1R2I3_CLOBU rbh
upp; uracil phosphoribosyltransferase
NECEvent2014_8_3_scaffold_293_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12723..13217
DNA (495bp) protein (165aa)
dctD; deoxycytidylate deaminase DctD (EC:3.5.4.12)
Deoxycytidylate deaminase n=4 Tax=Clostridium butyricum RepID=B1R2I4_CLOBU rbh
CMP/dCMP deaminase, zinc-binding {ECO:0000313|EMBL:EEP55486.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
NECEvent2014_8_3_scaffold_293_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13314..14462
DNA (1149bp) protein (383aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=4 Tax=Clostridium butyricum RepID=B1R2I5_CLOBU rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ENZ31222.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 6
NECEvent2014_8_3_scaffold_293_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14698..15879
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KJZ84958.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KJZ84958.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Thiolase n=5 Tax=Clostridium butyricum RepID=A6N8U2_CLOBU rbh
acetyl-CoA acetyltransferase
NECEvent2014_8_3_scaffold_293_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16738..17097
DNA (360bp) protein (120aa)
ATP synthase F0, I subunit n=2 Tax=Clostridium butyricum RepID=M8K284_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85516.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_3_scaffold_293_17

Not on your lists

17107..17796
DNA (690bp) protein (230aa)
ATP synthase subunit a n=4 Tax=Clostridium butyricum RepID=B1R2I8_CLOBU rbh
ATP synthase subunit a {ECO:0000313|EMBL:ETJ20328.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
atpB; ATP synthase subunit a
NECEvent2014_8_3_scaffold_293_18

Not on your lists

17828..18043
DNA (216bp) protein (72aa)
atpE; F-ATPase, F0 complex, subunit C AtpE (EC:3.6.3.14)
ATP synthase F0, C subunit n=4 Tax=Clostridium butyricum RepID=B1R2I9_CLOBU
ATP synthase F0, C subunit {ECO:0000313|EMBL:ETJ20329.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_8_3_scaffold_293_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18095..18574
DNA (480bp) protein (160aa)
ATP synthase subunit b n=4 Tax=Clostridium butyricum RepID=B1R2J0_CLOBU rbh
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
F0F1 ATP synthase subunit B
NECEvent2014_8_3_scaffold_293_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18577..19116
DNA (540bp) protein (180aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUH6_CLOBU rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
NECEvent2014_8_3_scaffold_293_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19127..20641
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
atpA1; ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUW6_CLOBU rbh
NECEvent2014_8_3_scaffold_293_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20817..21665
DNA (849bp) protein (283aa)
ATP synthase gamma chain n=4 Tax=Clostridium butyricum RepID=B1R2J3_CLOBU rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1523
atpG; ATP synthase gamma chain
NECEvent2014_8_3_scaffold_293_23
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21682..23073
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD1; ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=4 Tax=Clostridium butyricum RepID=B1R2J4_CLOBU rbh
NECEvent2014_8_3_scaffold_293_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23088..23462
DNA (375bp) protein (125aa)
ATP synthase epsilon chain n=4 Tax=Clostridium butyricum RepID=B1R2J5_CLOBU
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
atpC; ATP synthase epsilon chain
Displaying 24 items

View Taxonomy