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NECEvent2014_8_3_scaffold_550_9

Organism: NECEvent2014_8_3_Clostridium_butyricum_28_57

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 3968..7675

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2442
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 999.99
  • Bit_score: 2309
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=2 Tax=Clostridium butyricum RepID=M8K1Q3_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2442
  • Evalue 0.0
  • rbh

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3708
ATGGTACATCCTGTCCAAGTTGGAAAAAGAACAAGAATGAGTTTCGGTAAGGTTAATGACGTTACTGAAATGCCAAATCTAATTGAAGTACAATTAGATTCTTATCAATGGTTTTTAAGAGAAGGGTTGCATGAAGTTTTTGATGATATTAATCCTATCACAAACTTCACTGGAAACTTAGTGCTTGAATTCGTAGACTATAAACTTGATATGGAAAACATCAAGTATTCAGTGGAAGAATGTAAAGATAGAGATGCAACTTATGCAGCACCATTAAAAGTTTCGGTAAGATTACAAAATAATGAAACAGGTGAAATTAAAGAACAAGAAGTTTTTATGGGAGATTTCCCGCTGATGACAGAACAAGGTACATTTTTAATTAATGGTGCCGAAAGAGTTATTGTCAGCCAATTAGTAAGATCTCCAGGTGTATACTACAGCTACACTATAGATAAGAATGGTAAAAAGCTGTATTCTTCAACTGTAATTCCTAATAGAGGAGCATGGTTGGAGTATGAAACAGATTCTAATGATATTATTTATGTAAGAATCGATAAGACTAGAAAGCTACCAATTACTATTTTAGCAAGAGCTATGGGTATGGGAAGTGATCAAGAATTAATAGATTTCTTTGGAGAAGAAGAAAGATTTAGAGCTTCTATAGAAAAAGATAATACAAAGACAAAAGAAGAAGCATTACTTGAAATATATAAGAGATTAAGACCAGGTGAACCGCCTACAGTTGATAGTGCGATATCACTAATAGATACTTTATTCTTCGATGCAAAAAGATATGATTTATCAAGAGTAGGAAGATATAAGTTCAATAAAAAGCTTGCATTAGCTTTAAGAATAGCTAATCAAGTGGCTGCTACAGACATAATCAACCCTCAAACTGGTGAAGTTATGGTTGAAGAAGGTCAAAAGATAAGCAGATTAATGGCAGAAGACATCCAAAATAGTGGTATAAAATCTGTAGATTTATTAGTTGAAGATAAAGTTATAAAAGTAATTAGTAATAACTTTGTTGATTTAAGCAAGCAAGTTTCTTTCGATGTGAAGGGATTAGGAATTAAAGAATTAGTTCACTATCCAACATTAAAAGAAATCTTAGATAACTTCTCAGATGAAGACACTATTAAAAAGGAAATTAAGAAAAATATTCATAGACTTATTCCTAAACATATAATAAGAGATGATATATTTGCAACTATTAGTTATGAATTAGGATTAGCGTATGGAATAGGTTACGTTGATGACATAGATCATTTAGGAAATAGAAGATTAAGATCAGTAGGGGAATTATTACAAAATCAATTTAGAATTGGTTTATCAAGAATGGAAAGAGTAGTTAAAGAAAGAATGACTATTCAAGACCAAGAAGCGATAACTCCTCAAATGTTAATAAACATAAGACCAGTTGCAGCTGCTATTAAAGAATTCTTTGGAAGTTCGCAATTATCTCAATTCATGGATCAAACTAATCCATTATCAGAATTAACACATAAGAGAAGATTATCTGCATTAGGACCAGGAGGTCTTTCTAGAGAAAGAGCTGGTTTCGAAGTTAGAGACGTTCACCATTCTCATTATGGTAGAATGTGTCCTATTGAAACACCTGAAGGTCCAAATATAGGATTAATCAACTCTTTAGCTACATTTGCTAAAGTTAATGAATATGGATTTATTGAAACTCCATATAGAATTGTAGATAAAGAAAATGCAAGAGCAACTGATGAAATAAGATATTTCACAGCAGATGAAGAAGACCAATACTTAATTGCTCAAGCTAAGACTCCTATGGATGAAACAGGAAAGTTCTTAGAAGACAAAGTAATGGTAAGATACTTGGAAGATGTTTTATTTATTCCATCTAATCAAGTAGATTTAATAGACGTATCAGCAAGACAAATGGTTTCTGTTGCAACTGCAATGATTCCTTTCCTTGAAAATGATGATGCCACTAGAGCACTGATGGGATCAAACATGCAACGTCAAGCAGTTCCATTATTAAAAACTGAAGCTCCAGTTGTTGGAACTGGTATAGAATTTAAGGCTGCGGTAGACTCAGGAGTTTTACCAAAAGCTAAAAATGCAGGTGTTGTTTCTTATGTATCAGGAAGCGAAATTAGAATTAAGAGAGATTCTGATGGAGGAACTGATGTATATAAATTATTAAAGTTCAAAAGAACAAATGCAGGTACTTGTGCAAATCAAAGACCTATAGTTGATAAAGGTGAAATTGTATTTAAAAATCAAGTAATTGCAGATGGTCCTTCTACTGATTTAGGAGAAATTGCTTTAGGTAAAAACATCAGAATGGGATTCATAACTTGGGAAGGTTATAACTACGAAGATGCGATGCTTATTTCTGAAGAATTAGTTAGAGAAGATGTGTTTACATCAATGCATATTGAAGAATATGAATGTGAAGCTAGAGATACTAAGCTTGGACCAGAAGAAATAACTAGAGATATTCCTAATGTAAGTGATGATGCACTTAAGGATGTTGATGATAGAGGTATTATCAGAATTGGTGCTGAAGTTAGATCTGGCGATATATTAGTAGGTAAGGTGACTCCTAAGGGAGAAACAGAACTTACTGCTGAAGAAAGACTATTAAGAGCAATCTTTGGTGAGAAGGCTAGAGAAGTTAGAGATACTTCTTTAAGAGTACCTCACGGTGAAGCAGGTATAATAGTTGATATTAAAGTCTTTACAAGAGAAAATGGAGATGAATTAAATCCAGGAGTAAATGAACTTGTAAGATGTTATATTGCTCAAAAGAGAAAAATATCAGTTGGAGATAAGATGGCTGGACGTCATGGTAATAAAGGGGTTATCTCAAGAATATTACCTGAAGAAGATATGCCGTTCTTACCAGATGGTAGACCACTTCAAATCTGCTTAAATCCACTGGGAGTACCTTCGCGTATGAACATTGGTCAGGTTTTAGAAGTTCACTTAGGATGGGCTGCAAGTAATTTAGGATGGCATATATCTACACCAGTATTCGATGGTGCAACTCAAGATGAAATAACTGAATGCATGATTAAAGCTGGATTTAATGCTAATGCTAAAACAATTTTATATGATGGTAGAACAGGTGAACCATTTGATAATGAAGTAACTGTTGGTATCATGTATATGTTAAAACTTCACCATTTAGTTGATGATAAGATTCATGCTAGATCAACTGGACCATATTCATTAGTTACACAACAGCCATTAGGTGGTAAGGCTCAATTTGGTGGCCAAAGATTCGGGGAAATGGAAGTTTGGGCTTTAGAAGCATATGGTGCTGCTCATACATTACAAGAAATATTAACTGTTAAATCAGATGATGTTGTTGGTAGAGTTAAAACATATGAAGCTATTGTTAAGGGCGAAAATATTCCAGAACCAGGTGTACCAGAATCATTTAAGGTTCTTATAAAAGAACTTCAAGCTTTATGTTTAGACATTAAGGTATTAAATGATGATAATGAAGAAGTTGAATTAAAAGAATTTGCTGATGGAGACGTGGCAGATTTAGAAGTTAATATAGAAGGTGCAGAAGATTCTGTAGTTGCTGAACCAGAAATCGTAGATGATGGTTATGAAGAAAATAAAGAAGAAGATTTAGACGATATAGATTATGACGAAAATGCAGATATCGACGAGTTTGAAGGTCAATTAGAACTTGATGACTTTAATGATGAACACTAA
PROTEIN sequence
Length: 1236
MVHPVQVGKRTRMSFGKVNDVTEMPNLIEVQLDSYQWFLREGLHEVFDDINPITNFTGNLVLEFVDYKLDMENIKYSVEECKDRDATYAAPLKVSVRLQNNETGEIKEQEVFMGDFPLMTEQGTFLINGAERVIVSQLVRSPGVYYSYTIDKNGKKLYSSTVIPNRGAWLEYETDSNDIIYVRIDKTRKLPITILARAMGMGSDQELIDFFGEEERFRASIEKDNTKTKEEALLEIYKRLRPGEPPTVDSAISLIDTLFFDAKRYDLSRVGRYKFNKKLALALRIANQVAATDIINPQTGEVMVEEGQKISRLMAEDIQNSGIKSVDLLVEDKVIKVISNNFVDLSKQVSFDVKGLGIKELVHYPTLKEILDNFSDEDTIKKEIKKNIHRLIPKHIIRDDIFATISYELGLAYGIGYVDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVKERMTIQDQEAITPQMLINIRPVAAAIKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATFAKVNEYGFIETPYRIVDKENARATDEIRYFTADEEDQYLIAQAKTPMDETGKFLEDKVMVRYLEDVLFIPSNQVDLIDVSARQMVSVATAMIPFLENDDATRALMGSNMQRQAVPLLKTEAPVVGTGIEFKAAVDSGVLPKAKNAGVVSYVSGSEIRIKRDSDGGTDVYKLLKFKRTNAGTCANQRPIVDKGEIVFKNQVIADGPSTDLGEIALGKNIRMGFITWEGYNYEDAMLISEELVREDVFTSMHIEEYECEARDTKLGPEEITRDIPNVSDDALKDVDDRGIIRIGAEVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGIIVDIKVFTRENGDELNPGVNELVRCYIAQKRKISVGDKMAGRHGNKGVISRILPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGWAASNLGWHISTPVFDGATQDEITECMIKAGFNANAKTILYDGRTGEPFDNEVTVGIMYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQALCLDIKVLNDDNEEVELKEFADGDVADLEVNIEGAEDSVVAEPEIVDDGYEENKEEDLDDIDYDENADIDEFEGQLELDDFNDEH*