Alias: 178_003_scaffold_78
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
NECEvent2014_8_3_scaffold_78_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(542..3061)
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DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=Clostridium perfringens RepID=B1RTP9_CLOPF
rbh
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NECEvent2014_8_3_scaffold_78_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3083..4999)
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gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=451754 species="Bacteria; Fi
DNA gyrase subunit B n=8 Tax=Clostridium perfringens RepID=Q0TV59_CLOP1
rbh
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NECEvent2014_8_3_scaffold_78_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5236..5529)
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Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RTQ1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70221.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
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NECEvent2014_8_3_scaffold_78_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5510..6595)
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DNA replication and repair protein RecF n=11 Tax=Clostridium perfringens RepID=RECF_CLOP1
rbh
recF; recombination protein F
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
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NECEvent2014_8_3_scaffold_78_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6651..6857)
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S4 domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CRF3_CLOPF
S4 domain-containing protein
S4 domain protein {ECO:0000313|EMBL:EDT22249.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.
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NECEvent2014_8_3_scaffold_78_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6983..8083)
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dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=451755 species="Bacter
DNA polymerase III subunit beta n=11 Tax=Clostridium perfringens RepID=H7CRF2_CLOPF
rbh
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NECEvent2014_8_3_scaffold_78_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8378..9751)
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Chromosomal replication initiator protein DnaA n=7 Tax=Clostridium perfringens RepID=DNAA_CLOP1
rbh
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
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NECEvent2014_8_3_scaffold_78_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10782..10916
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50S ribosomal protein L34 n=11 Tax=Clostridium perfringens RepID=RL34_CLOP1
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
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NECEvent2014_8_3_scaffold_78_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10977..11354
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rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=11 Tax=Clostridium perfringens RepID=RNPA_CLOP1
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
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NECEvent2014_8_3_scaffold_78_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11326..11535
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Putative membrane protein insertion efficiency factor n=11 Tax=Clostridium perfringens RepID=YIDD_CLOP1
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
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NECEvent2014_8_3_scaffold_78_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11569..12285
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Membrane protein insertase YidC n=3 Tax=Clostridium perfringens RepID=YIDC_CLOPE
rbh
spoIIIJ; inner membrane protein translocase component YidC
Membrane protein OxaA {ECO:0000313|EMBL:EDT13624.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
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NECEvent2014_8_3_scaffold_78_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12327..12950
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SpoIIIJ-associated protein n=3 Tax=Clostridium perfringens RepID=Q8XH29_CLOPE
rbh
jag; SpoIIIJ-associated protein
SpoIIIJ-associated protein {ECO:0000313|EMBL:BAB82362.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain
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NECEvent2014_8_3_scaffold_78_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13293..14669
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tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
tRNA modification GTPase MnmE n=9 Tax=Clostridium perfringens RepID=MNME_CLOP1
rbh
trmE; tRNA modification GTPase TrmE
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NECEvent2014_8_3_scaffold_78_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14684..16576
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tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=MNMG_CLOPE
rbh
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=195102 species="Bacter
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NECEvent2014_8_3_scaffold_78_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16753..17472
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Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Clostridium perfringens RepID=H7D011_CLOPF
rbh
gidB; 16S rRNA methyltransferase GidB
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NECEvent2014_8_3_scaffold_78_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17723..18496
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Sporulation initiation inhibitor protein soj n=10 Tax=Clostridium perfringens RepID=H7D010_CLOPF
rbh
soj; sporulation initiation inhibitor protein soj
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:EDT13616.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
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NECEvent2014_8_3_scaffold_78_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
18497..19357
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Stage 0 sporulation protein J n=9 Tax=Clostridium perfringens RepID=H7D009_CLOPF
rbh
stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:EDT22649.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str
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NECEvent2014_8_3_scaffold_78_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
19406..19903
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Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D008_CLOPF
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25916.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
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NECEvent2014_8_3_scaffold_78_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20054..20644)
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Putative sporulation protein YyaC n=2 Tax=Clostridium perfringens RepID=B1V5R5_CLOPF
rbh
Putative sporulation protein YyaC {ECO:0000313|EMBL:EDT70844.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D
sporulation protein YyaC
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NECEvent2014_8_3_scaffold_78_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20694..21758)
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Sporulation integral membrane protein YtvI n=4 Tax=Clostridium perfringens RepID=B1RAV4_CLOPF
rbh
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EDT22635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
sporulation integral membrane protein YtvI
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NECEvent2014_8_3_scaffold_78_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21770..22930)
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Cysteine desulfurase family protein n=2 Tax=Clostridium perfringens RepID=B1RJG2_CLOPF
rbh
nifS; cysteine desulfurase
Probable aminotransferase required for NAD biosynthesis {ECO:0000313|EMBL:BAB82353.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
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NECEvent2014_8_3_scaffold_78_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22873..23589)
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LysE family translocator protein n=9 Tax=Clostridium perfringens RepID=H7D004_CLOPF
rbh
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
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NECEvent2014_8_3_scaffold_78_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23749..23982
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Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
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NECEvent2014_8_3_scaffold_78_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24015..24875
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Mechanosensitive ion channel family protein n=7 Tax=Clostridium perfringens RepID=Q0TM06_CLOP1
rbh
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
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NECEvent2014_8_3_scaffold_78_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24912..25124
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Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D001_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70820.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
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NECEvent2014_8_3_scaffold_78_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25268..25555
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30S ribosomal protein S6 n=11 Tax=Clostridium perfringens RepID=RS6_CLOP1
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
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NECEvent2014_8_3_scaffold_78_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25569..26021
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Single-stranded DNA-binding protein n=10 Tax=Clostridium perfringens RepID=SSB_CLOPE
rbh
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=289380 species="Bacteria; Firmicutes; Clostrid
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NECEvent2014_8_3_scaffold_78_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26052..26294
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30S ribosomal protein S18 n=11 Tax=Clostridium perfringens RepID=RS18_CLOP1
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
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NECEvent2014_8_3_scaffold_78_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26577..26894
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Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZZ7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
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NECEvent2014_8_3_scaffold_78_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
26912..27907
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Putative membrane protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXW1_CLOPF
rbh
Putative membrane protein {ECO:0000313|EMBL:EDT13481.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
hypothetical protein
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