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NECEvent2014_8_3_scaffold_180

Alias: 178_003_scaffold_180

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_180_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(157..1356)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWI5_CLOPF rbh
Monovalent cation:proton antiporter-2 (CPA2) family protein {ECO:0000313|EMBL:EIA18519.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
monovalent cation:proton antiporter-2 (CPA2) family protein
NECEvent2014_8_3_scaffold_180_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1662..2333
DNA (672bp) protein (224aa)
DNA-binding response regulator n=6 Tax=Clostridium perfringens RepID=Q0TUK1_CLOP1 rbh
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT14643.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_3_scaffold_180_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2323..3753
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase n=3 Tax=Clostridium perfringens RepID=B1BUH0_CLOPF rbh
NECEvent2014_8_3_scaffold_180_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3746..4534
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRR2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80873.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_180_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4515..5534
DNA (1020bp) protein (340aa)
Putative iron compound ABC transporter, iron compound-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRR3_CLOPF rbh
iron(III) ABC transporter
Probable iron(III) ABC transporter {ECO:0000313|EMBL:BAB79939.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_3_scaffold_180_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5735..7072
DNA (1338bp) protein (446aa)
Glycerol-3-phosphate transporter n=3 Tax=Clostridium perfringens RepID=Q8XNV0_CLOPE rbh
glpT; glycerol-3-phosphate transporter
Putative glycerol-3-phosphate transporter {ECO:0000313|EMBL:EDT26584.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
NECEvent2014_8_3_scaffold_180_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7230..8675)
DNA (1446bp) protein (482aa)
Arylsulfatase; EC=3.1.6.1;; Cys-type sulfatase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type
Arylsulfatase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=SULF_CLOPE rbh
arylsulfatase
NECEvent2014_8_3_scaffold_180_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8990..9175)
DNA (186bp) protein (62aa)
Iron-sulfur cluster-binding protein n=7 Tax=Clostridium perfringens RepID=Q0SWE4_CLOPS
iron-sulfur cluster-binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDT26642.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_3_scaffold_180_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9302..9607)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUK8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87450.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_3_scaffold_180_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9582..9977)
DNA (396bp) protein (132aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q0SWE8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14657.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_180_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9964..11652)
DNA (1689bp) protein (563aa)
ABC transporter, permease/ATP-binding protein n=3 Tax=Clostridium perfringens RepID=B1BUG2_CLOPF rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT71973.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
ABC transporter ATP-binding/permease
NECEvent2014_8_3_scaffold_180_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11653..13383)
DNA (1731bp) protein (577aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUG1_CLOPF rbh
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT14638.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
multidrug resistance protein 1
NECEvent2014_8_3_scaffold_180_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13487..14077)
DNA (591bp) protein (197aa)
Cell wall anchor domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH62_CLOPF
Cell wall anchor domain protein {ECO:0000313|EMBL:EDS80862.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C s
cell wall anchor domain-containing protein
NECEvent2014_8_3_scaffold_180_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14164..14922
DNA (759bp) protein (253aa)
Transcriptional regulator, AraC family n=6 Tax=Clostridium perfringens RepID=Q0TUL8_CLOP1 rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS80868.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_3_scaffold_180_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15173..15994)
DNA (822bp) protein (274aa)
DnaJ-related protein n=2 Tax=Clostridium perfringens RepID=Q8XNW4_CLOPE rbh
DnaJ-like protein
DnaJ domain protein {ECO:0000313|EMBL:EDT26592.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
NECEvent2014_8_3_scaffold_180_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16430..17626)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=3 Tax=Clostridium perfringens RepID=B1BH60_CLOPF rbh
NECEvent2014_8_3_scaffold_180_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18026..21553)
DNA (3528bp) protein (1176aa)
Probable exonuclease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNW6_CLOPE rbh
sbcC; exonuclease SbcC rbh
Probable exonuclease {ECO:0000313|EMBL:BAB79922.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
NECEvent2014_8_3_scaffold_180_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21531..22754)
DNA (1224bp) protein (408aa)
Putative nuclease SbcCD, D subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH58_CLOPF rbh
Putative nuclease SbcCD, D subunit {ECO:0000313|EMBL:EDS80825.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
nuclease SbcCD subunit D
NECEvent2014_8_3_scaffold_180_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23155..23799
DNA (645bp) protein (215aa)
heme oxygenase 2 (EC:1.14.99.3)
Heme oxygenase {ECO:0000313|EMBL:ABG86403.1}; EC=1.14.99.3 {ECO:0000313|EMBL:ABG86403.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Heme oxygenase 2 n=6 Tax=Clostridium perfringens RepID=H7CS08_CLOPF rbh
NECEvent2014_8_3_scaffold_180_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24373..25188
DNA (816bp) protein (272aa)
Mechanosensitive ion channel family protein n=9 Tax=Clostridium perfringens RepID=H7CS07_CLOPF rbh
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EIA18496.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_8_3_scaffold_180_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25367..26137)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUE8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT14684.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_180_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26619..28817)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CS05_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18494.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_8_3_scaffold_180_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28845..29726)
DNA (882bp) protein (294aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CS04_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18493.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
Displaying 23 items

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