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NECEvent2014_8_3_scaffold_204

Alias: 178_003_scaffold_204

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_204_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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210..1208
DNA (999bp) protein (333aa)
Protein-tyrosine phosphatase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ09_CLOPE rbh
ptp; hypothetical protein
Protein-tyrosine phosphatase {ECO:0000313|EMBL:BAB81658.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_8_3_scaffold_204_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1455..5063
DNA (3609bp) protein (1203aa)
cpdB, yfkN; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (EC:3.1.4.16 3.1.3.6)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRM9_CLOPS rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:ABG85521.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_8_3_scaffold_204_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5304..8858
DNA (3555bp) protein (1185aa)
cpdB, yfkN; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (EC:3.1.3.6 3.1.4.16)
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL91_CLOPF rbh
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT16231.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_8_3_scaffold_204_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9157..9750
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CXX6_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16490.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_204_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9978..10583
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridial
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RUVA_CLOPS rbh
ruvA; Holliday junction DNA helicase RuvA
NECEvent2014_8_3_scaffold_204_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10597..11637
DNA (1041bp) protein (347aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridial
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RUVB_CLOPS rbh
NECEvent2014_8_3_scaffold_204_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11659..12684
DNA (1026bp) protein (342aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=8 Tax=Clostridium perfringens RepID=QUEA_CLOP1 rbh
NECEvent2014_8_3_scaffold_204_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12708..13850
DNA (1143bp) protein (381aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=6 Tax=Clostridium perfringens RepID=TGT_CLOP1 rbh
NECEvent2014_8_3_scaffold_204_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13889..14158
DNA (270bp) protein (90aa)
Preprotein translocase subunit YajC n=9 Tax=Clostridium perfringens RepID=H7CXX1_CLOPF
yajC; preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EIA16485.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_3_scaffold_204_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14354..14494
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CXX0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25408.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_3_scaffold_204_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14564..15937
DNA (1374bp) protein (458aa)
AstB/chuR-related protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ18_CLOPE rbh
astB/chuR-related protein
AstB/chuR-related protein {ECO:0000313|EMBL:BAB81649.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 1
NECEvent2014_8_3_scaffold_204_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16035..17294
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRN9_CLOPS rbh
secD; preprotein translocase subunit SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_3_scaffold_204_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17287..18156
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=8 Tax=Clostridium perfringens RepID=H7CXW7_CLOPF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
secF; preprotein translocase subunit SecF
NECEvent2014_8_3_scaffold_204_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18356..19210
DNA (855bp) protein (285aa)
DHH domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXW6_CLOPF rbh
DHH domain-containing protein
DHH domain protein {ECO:0000313|EMBL:EDT16263.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;
NECEvent2014_8_3_scaffold_204_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19254..19772
DNA (519bp) protein (173aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=289380 species="Bacteria; Firmi
Adenine phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=APT_CLOP1 rbh
NECEvent2014_8_3_scaffold_204_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19924..22104
DNA (2181bp) protein (727aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:EDT16339.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EDT16339.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=3 Tax=Clostridium perfringens RepID=H7CXW4_CLOPF rbh
NECEvent2014_8_3_scaffold_204_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22119..22568
DNA (450bp) protein (150aa)
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-aminoacyl-tRNA deacylase {ECO:0000255|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000255|HAMAP-Rule:MF_00518};; D-tyrosyl-tRNA(Tyr) deacylase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clo
D-tyrosyl-tRNA(Tyr) deacylase n=8 Tax=Clostridium perfringens RepID=DTD_CLOP1
NECEvent2014_8_3_scaffold_204_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22728..23348
DNA (621bp) protein (207aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V033_CLOPF rbh
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDT72783.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
metallo-beta-lactamase family protein
NECEvent2014_8_3_scaffold_204_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23338..24780
DNA (1443bp) protein (481aa)
Putative ferrochelatase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R305_CLOPF rbh
Putative ferrochelatase {ECO:0000313|EMBL:EDT25200.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
coproporphyrinogen III oxidase
NECEvent2014_8_3_scaffold_204_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24812..26059
DNA (1248bp) protein (416aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=2 Tax=Clostridium perfringens RepID=H7CXW0_CLOPF rbh
NECEvent2014_8_3_scaffold_204_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26080..27873
DNA (1794bp) protein (598aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EDT16325.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDT16325.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=3 Tax=Clostridium perfringens RepID=H7CXV9_CLOPF rbh
Displaying 21 items

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