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NECEvent2014_8_3_scaffold_294

Alias: 178_003_scaffold_294

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_294_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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163..951
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ78_CLOPE rbh
histidinol-phosphatase rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB81589.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_294_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1038..2393)
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP74_CLOP1 rbh
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str.
NECEvent2014_8_3_scaffold_294_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2474..4855)
DNA (2382bp) protein (794aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIX6_CLOPF rbh
NECEvent2014_8_3_scaffold_294_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4879..5898)
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=6 Tax=Clostridium perfringens RepID=SYFA_CLOP1 rbh
NECEvent2014_8_3_scaffold_294_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6510..7283)
DNA (774bp) protein (258aa)
RNA methyltransferase, TrmH family n=4 Tax=Clostridium perfringens RepID=B1RB42_CLOPF rbh
TrmH family RNA methyltransferase
Probable rRNA methylase {ECO:0000313|EMBL:BAB81595.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_294_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7309..7974)
DNA (666bp) protein (222aa)
Probable potassium uptake system protein n=10 Tax=Clostridium perfringens RepID=Q8XJ71_CLOPE rbh
potassium uptake protein
Putative potassium uptake protein {ECO:0000313|EMBL:EIA16737.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
NECEvent2014_8_3_scaffold_294_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7997..9337)
DNA (1341bp) protein (447aa)
TrkH family potassium uptake protein n=5 Tax=Clostridium perfringens RepID=H7CXT3_CLOPF rbh
TrkH family potassium uptake protein
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDT25839.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_3_scaffold_294_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9566..9925)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=10 Tax=Clostridium perfringens RepID=RL20_CLOP1
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_3_scaffold_294_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9955..10152)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=9 Tax=Clostridium perfringens RepID=RL35_CLOP1
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_8_3_scaffold_294_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10174..10695)
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 n=5 Tax=Clostridium perfringens RepID=H7CXT6_CLOPF rbh
Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
infC; translation initiation factor IF-3
NECEvent2014_8_3_scaffold_294_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10977..11855)
DNA (879bp) protein (293aa)
Putative sporulation protein YtxC n=3 Tax=Clostridium perfringens RepID=B1BIW8_CLOPF rbh
Putative sporulation protein YtxC {ECO:0000313|EMBL:EDS80228.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
sporulation protein YtxC
NECEvent2014_8_3_scaffold_294_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11990..12685
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL37_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT25255.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_8_3_scaffold_294_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12940..13920
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ64_CLOPE rbh
BadF/BadG/BcrA/BcrD ATPase
Uncharacterized protein {ECO:0000313|EMBL:BAB81603.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_294_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14053..14607)
DNA (555bp) protein (185aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIW5_CLOPF rbh
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS80141.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_294_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14773..15327)
DNA (555bp) protein (185aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XJ62_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81605.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_294_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15626..16003
DNA (378bp) protein (126aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXU2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16747.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_294_trna_4
unknown

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comp(16114..16185)
DNA (72bp)
transferRNA
NECEvent2014_8_3_scaffold_294_trna_3
unknown

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comp(16194..16264)
DNA (71bp)
transferRNA
NECEvent2014_8_3_scaffold_294_trna_2
unknown

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comp(16271..16342)
DNA (72bp)
transferRNA
NECEvent2014_8_3_scaffold_294_trna_1
unknown

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comp(16351..16423)
DNA (73bp)
transferRNA
NECEvent2014_8_3_scaffold_294_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16484..17443)
DNA (960bp) protein (320aa)
33 kDa chaperonin n=9 Tax=Clostridium perfringens RepID=HSLO_CLOP1 rbh
hslO; Hsp33-like chaperonin
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=883064 species="Bacteria; Firmicutes; Clostri
NECEvent2014_8_3_scaffold_294_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17459..18181)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP58_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87433.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_3_scaffold_294_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18248..18520)
DNA (273bp) protein (91aa)
Small acid-soluble spore protein beta n=10 Tax=Clostridium perfringens RepID=H7CX36_CLOPF
beta type small acid-soluble spore protein
Small acid-soluble spore protein beta {ECO:0000313|EMBL:EIA16750.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_3_scaffold_294_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18722..19699
DNA (978bp) protein (326aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=3 Tax=Clostridium perfringens RepID=Q0TP56_CLOP1 rbh
NECEvent2014_8_3_scaffold_294_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19724..20599
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=195102 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPA_CLOPE rbh
NECEvent2014_8_3_scaffold_294_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20672..21436
DNA (765bp) protein (255aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=195102 spec
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPB_CLOPE rbh
NECEvent2014_8_3_scaffold_294_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21732..22874)
DNA (1143bp) protein (381aa)
Probable asparate aminotransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ54_CLOPE rbh
patA; asparate aminotransferase rbh
Probable asparate aminotransferase {ECO:0000313|EMBL:BAB81613.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_3_scaffold_294_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22874..23401)
DNA (528bp) protein (176aa)
Probable cob(I)alamin adenosyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ53_CLOPE rbh
cob(I)alamin adenosyltransferase
Probable cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:BAB81614.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
Displaying 28 items

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