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NECEvent2014_8_3_scaffold_387

Alias: 178_003_scaffold_387

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_387_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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182..739
DNA (558bp) protein (186aa)
Elongation factor P n=10 Tax=Clostridium perfringens RepID=EFP_CLOP1 rbh
efp; elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
NECEvent2014_8_3_scaffold_387_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

853..1215
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXM8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16683.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_387_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1414..2298
DNA (885bp) protein (295aa)
Stage III sporulation protein AA n=6 Tax=Clostridium perfringens RepID=Q0TPC4_CLOP1 rbh
stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:EDS80371.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
NECEvent2014_8_3_scaffold_387_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2445..2960
DNA (516bp) protein (172aa)
Stage III sporulation protein AB n=7 Tax=Clostridium perfringens RepID=Q0SRZ2_CLOPS rbh
stage III sporulation protein SpoAB
Stage III sporulation protein AB {ECO:0000313|EMBL:EDT26298.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
NECEvent2014_8_3_scaffold_387_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3036..3233
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=10 Tax=Clostridium perfringens RepID=H7CXM5_CLOPF
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:EDT15138.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_8_3_scaffold_387_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3321..3707
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=10 Tax=Clostridium perfringens RepID=H7CXM4_CLOPF
stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:EDT26307.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
NECEvent2014_8_3_scaffold_387_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3718..4890
DNA (1173bp) protein (391aa)
Stage III sporulation protein AE n=4 Tax=Clostridium perfringens RepID=H7CXM3_CLOPF rbh
stage III sporulation protein AE
Stage III sporulation protein AE {ECO:0000313|EMBL:EIA16678.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_3_scaffold_387_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4898..5455
DNA (558bp) protein (186aa)
Stage III sporulation protein AF n=2 Tax=Clostridium perfringens RepID=Q0TPC9_CLOP1 rbh
spoIIIAF; stage III sporulation protein AF
Stage III sporulation protein AF {ECO:0000313|EMBL:EDT26293.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
NECEvent2014_8_3_scaffold_387_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5470..6075
DNA (606bp) protein (202aa)
Stage III sporulation protein AG n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSG1_CLOPF rbh
spoIIIAG; stage III sporulation protein AG
Stage III sporulation protein AG {ECO:0000313|EMBL:BAB81533.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
NECEvent2014_8_3_scaffold_387_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6101..6598
DNA (498bp) protein (166aa)
Stage III sporulation protein AH n=10 Tax=Clostridium perfringens RepID=H7CXM0_CLOPF rbh
stage III sporulation protein AH
Stage III sporulation protein AH {ECO:0000313|EMBL:EIA16675.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_3_scaffold_387_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6683..7072
DNA (390bp) protein (130aa)
Alkaline shock protein n=10 Tax=Clostridium perfringens RepID=H7CXL9_CLOPF
asp; alkaline shock protein
Alkaline shock protein {ECO:0000313|EMBL:EDT26326.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F49
NECEvent2014_8_3_scaffold_387_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7191..7598
DNA (408bp) protein (136aa)
N utilization substance protein B homolog n=9 Tax=Clostridium perfringens RepID=NUSB_CLOP1
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=451755 species="Bacteria; Firmi
NECEvent2014_8_3_scaffold_387_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7648..8481
DNA (834bp) protein (278aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9) rbh
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
Bifunctional protein FolD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=FOLD_CLOP1 rbh
NECEvent2014_8_3_scaffold_387_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8483..9685
DNA (1203bp) protein (401aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RKW5_CLOPF rbh
NECEvent2014_8_3_scaffold_387_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9704..9931
DNA (228bp) protein (76aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=10 Tax=Clostridium perfringens RepID=EX7S_CLOP1
NECEvent2014_8_3_scaffold_387_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9921..10793
DNA (873bp) protein (291aa)
ispA; geranyltranstransferase (EC:2.5.1.10)
Geranyltranstransferase n=4 Tax=Clostridium perfringens RepID=H7CXL4_CLOPF rbh
Geranyltranstransferase {ECO:0000313|EMBL:EIA16669.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_387_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10814..12673
DNA (1860bp) protein (620aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSF3_CLOPF rbh
NECEvent2014_8_3_scaffold_387_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12685..13500
DNA (816bp) protein (272aa)
Hemolysin A n=2 Tax=Clostridium perfringens RepID=H7CXL2_CLOPF rbh
hlyD; hemolysin A rbh
Probable hemolysin {ECO:0000313|EMBL:BAB81524.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Typ
NECEvent2014_8_3_scaffold_387_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13585..14415
DNA (831bp) protein (277aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=3 Tax=Clostridium perfringens RepID=PPNK_CLOPE rbh
NAD(+)/NADH kinase
NECEvent2014_8_3_scaffold_387_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14438..14890
DNA (453bp) protein (151aa)
Arginine repressor n=9 Tax=Clostridium perfringens RepID=H7CXL0_CLOPF
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS19
NECEvent2014_8_3_scaffold_387_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14906..16603
DNA (1698bp) protein (566aa)
DNA repair protein RecN n=2 Tax=Clostridium perfringens RepID=Q0TPE2_CLOP1 rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
recN; DNA repair protein RecN
NECEvent2014_8_3_scaffold_387_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16780..17940
DNA (1161bp) protein (387aa)
Stage IV sporulation protein B n=5 Tax=Clostridium perfringens RepID=Q0TPE3_CLOP1 rbh
stage IV sporulation protein B
Stage IV sporulation protein B {ECO:0000313|EMBL:EDT15158.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
NECEvent2014_8_3_scaffold_387_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18114..18932
DNA (819bp) protein (273aa)
Spo0A protein n=9 Tax=Clostridium perfringens RepID=Q0TPE4_CLOP1 rbh
spo0A; Spo0A protein
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_8_3_scaffold_387_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19009..19215
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJE8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15118.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Displaying 24 items

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