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NECEvent2014_8_3_scaffold_394

Alias: 178_003_scaffold_394

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_394_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(240..1721)
DNA (1482bp) protein (494aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMA
Probable cytosol aminopeptidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=AMPA_CLOPE rbh
NECEvent2014_8_3_scaffold_394_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1870..2421)
DNA (552bp) protein (184aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZK7_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15403.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_394_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2551..3060)
DNA (510bp) protein (170aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHI1_CLOPE rbh
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein
NECEvent2014_8_3_scaffold_394_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3169..3777
DNA (609bp) protein (203aa)
HD domain protein n=2 Tax=Clostridium perfringens RepID=B1BHT6_CLOPF rbh
HD domain protein {ECO:0000313|EMBL:EDS80632.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein rbh
NECEvent2014_8_3_scaffold_394_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3835..5226)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHH9_CLOPE rbh
MATE efflux family protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82211.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_394_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5609..6607)
DNA (999bp) protein (333aa)
add; adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000255|HAMAP-Rule:MF_00540}; EC=3.5.4.4 {ECO:0000255|HAMAP-Rule:MF_00540};; Adenosine aminohydrolase {ECO:0000255|HAMAP-Rule:MF_00540}; TaxID=195102 species="Bacteria; Firmic
Adenosine deaminase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=ADD_CLOPE rbh
NECEvent2014_8_3_scaffold_394_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7000..9117)
DNA (2118bp) protein (706aa)
nrdD; anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2) rbh
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHH7_CLOPE rbh
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:BAB82213.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_3_scaffold_394_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9377..10444
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XHH6_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80684.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_8_3_scaffold_394_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10704..11549
DNA (846bp) protein (282aa)
DegV family protein n=3 Tax=Clostridium perfringens RepID=B1RFN2_CLOPF rbh
DegV family protein {ECO:0000313|EMBL:EDT72850.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
degV family protein
NECEvent2014_8_3_scaffold_394_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11552..11992
DNA (441bp) protein (147aa)
PadR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CZL5_CLOPF
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:EIA15815.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_3_scaffold_394_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12044..12232)
DNA (189bp) protein (63aa)
Ferredoxin n=6 Tax=Clostridium perfringens RepID=H7CZL6_CLOPF
ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:EDS80624.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.
NECEvent2014_8_3_scaffold_394_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12380..13234)
DNA (855bp) protein (285aa)
Protein mrp homolog n=10 Tax=Clostridium perfringens RepID=MRP_CLOPE rbh
ATPase
Mrp/NBP35 ATP-binding family protein {ECO:0000313|EMBL:EDT15379.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_3_scaffold_394_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13255..14094)
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XHH2_CLOPE rbh
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:BAB82219.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_394_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14084..14854)
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase 2 {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
Prolipoprotein diacylglyceryl transferase 2 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LGT2_CLOPE rbh
prolipoprotein diacylglyceryl transferase
NECEvent2014_8_3_scaffold_394_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14957..15547)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQ36_CLOPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86907.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_3_scaffold_394_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15678..17300)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHS4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80714.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_394_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17400..18257)
DNA (858bp) protein (286aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=8 Tax=Clostridium perfringens RepID=RSMA_CLOP1 rbh
NECEvent2014_8_3_scaffold_394_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18269..18817)
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=3 Tax=Clostridium perfringens RepID=Q8XHG7_CLOPE rbh
primase-like protein
Displaying 18 items

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